1. Home
  2. Species
  3. Seminavis robusta
  4. Sequence
  5. Sro571_g168620.1

Sro571_g168620.1 (Contig3541.g27375)


Aliases : Contig3541.g27375

Description : AMP-dependent synthetase/ligase [Interproscan].


Gene families : OG_01_0000117 (OrthoFinder) Phylogenetic Tree(s): OG0000117_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro571_g168620.1
Cluster HCCA: Cluster_295

Target Alias Description ECC score Gene Family Method Actions
Sro2071_g313390.1 Contig4578.g34173 D-alanine--D-alanyl carrier protein ligase 0.04 OrthoFinder
Sro3850_g351460.1 Contig3629.g28053 Hypothetical protein 0.04 OrthoFinder
Sro723_g193000.1 Contig2673.g21644 D-alanine--D-alanyl carrier protein ligase 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0007165 signal transduction IEP Enrichment
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig 122 381
IPR000873 AMP-dep_Synth/Lig 26 97
No external refs found!