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  5. Sro56_g032950.1

Sro56_g032950.1 (Contig3029.g24171)


Aliases : Contig3029.g24171

Description : Tryptophan synthase beta chain


Gene families : OG_01_0001123 (OrthoFinder) Phylogenetic Tree(s): OG0001123_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro56_g032950.1
Cluster HCCA: Cluster_251

Target Alias Description ECC score Gene Family Method Actions
Cre03.g161400 30787288, WSN2 Amino acid metabolism.biosynthesis.shikimate... 0.02 OrthoFinder
XM_002507971.1 MICPUN_53147, 53147 Pyridoxal-phosphate dependent enzyme [Interproscan]. 0.01 OrthoFinder
lcl|LHPG02000018.1_cds_PRW33003.1_3686 PRW33003 Tryptophan synthase beta chain 1 isoform A 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Enrichment
MF GO:0005534 galactose binding IEP Enrichment
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Enrichment
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP Enrichment
BP GO:0018193 peptidyl-amino acid modification IEP Enrichment
BP GO:0018208 peptidyl-proline modification IEP Enrichment
MF GO:0030246 carbohydrate binding IEP Enrichment
BP GO:0030328 prenylcysteine catabolic process IEP Enrichment
BP GO:0030329 prenylcysteine metabolic process IEP Enrichment
BP GO:0042219 cellular modified amino acid catabolic process IEP Enrichment
MF GO:0046912 acyltransferase, acyl groups converted into alkyl on transfer IEP Enrichment
MF GO:0048029 monosaccharide binding IEP Enrichment
BP GO:1901565 organonitrogen compound catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR001926 PLP-dep 75 404
No external refs found!