Sro56_g032810.1 (Contig3029.g24157)


Aliases : Contig3029.g24157

Description : Pirin-like protein


Gene families : OG_01_0000649 (OrthoFinder) Phylogenetic Tree(s): OG0000649_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro56_g032810.1
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020610.65 tig00020610_g12008.t1 Pirin-like protein OS=Solanum lycopersicum 0.01 OrthoFinder
Cre16.g674964 30776821 Pirin-like protein OS=Solanum lycopersicum 0.02 OrthoFinder
TP07G02770.1 No alias Pirin, N-terminal domain; Pirin, C-terminal domain... 0.01 OrthoFinder
lcl|LHPG02000006.1_cds_PRW57785.1_8661 PRW57785 Endoplasmic reticulum mannosyl-oligosaccharide... 0.02 OrthoFinder
lcl|VRMN01000010.1_cds_KAA8492056.1_5239 KAA8492056 Putative quercetin 2,3-dioxygenase 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP Enrichment
BP GO:0005996 monosaccharide metabolic process IEP Enrichment
BP GO:0006631 fatty acid metabolic process IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0009166 nucleotide catabolic process IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
BP GO:0019321 pentose metabolic process IEP Enrichment
BP GO:0019439 aromatic compound catabolic process IEP Enrichment
BP GO:0019566 arabinose metabolic process IEP Enrichment
MF GO:0033218 amide binding IEP Enrichment
BP GO:0034404 nucleobase-containing small molecule biosynthetic process IEP Enrichment
BP GO:0034655 nucleobase-containing compound catabolic process IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0044270 cellular nitrogen compound catabolic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
BP GO:0044283 small molecule biosynthetic process IEP Enrichment
BP GO:0046373 L-arabinose metabolic process IEP Enrichment
BP GO:0046434 organophosphate catabolic process IEP Enrichment
MF GO:0046556 alpha-L-arabinofuranosidase activity IEP Enrichment
BP GO:0046700 heterocycle catabolic process IEP Enrichment
MF GO:0050660 flavin adenine dinucleotide binding IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
MF GO:0120227 acyl-CoA binding IEP Enrichment
BP GO:1901292 nucleoside phosphate catabolic process IEP Enrichment
BP GO:1901361 organic cyclic compound catabolic process IEP Enrichment
MF GO:1901567 fatty acid derivative binding IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
MF GO:1901681 sulfur compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR008778 Pirin_C_dom 215 319
IPR003829 Pirin_N_dom 58 138
No external refs found!