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  5. Sro56_g032800.1

Sro56_g032800.1 (Contig3029.g24156)


Aliases : Contig3029.g24156

Description : Pirin-like protein


Gene families : OG_01_0000649 (OrthoFinder) Phylogenetic Tree(s): OG0000649_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro56_g032800.1

Target Alias Description ECC score Gene Family Method Actions
Cre16.g674964 30776821 Pirin-like protein OS=Solanum lycopersicum 0.01 OrthoFinder
EOD16199 No alias Pirin, N-terminal domain; Pirin, C-terminal domain... 0.02 OrthoFinder
Sro244_g097220.1 Contig2788.g22438 Quercetin 2,3-dioxygenase PA2418 0.07 OrthoFinder
lcl|LHPG02000006.1_cds_PRW57785.1_8661 PRW57785 Endoplasmic reticulum mannosyl-oligosaccharide... 0.03 OrthoFinder
lcl|VRMN01000010.1_cds_KAA8492056.1_5239 KAA8492056 Putative quercetin 2,3-dioxygenase 0.03 OrthoFinder
lcl|VRMN01000023.1_cds_KAA8490566.1_5932 KAA8490566 Putative quercetin 2,3-dioxygenase 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP Enrichment
BP GO:0016567 protein ubiquitination IEP Enrichment
MF GO:0019787 ubiquitin-like protein transferase activity IEP Enrichment
BP GO:0032446 protein modification by small protein conjugation IEP Enrichment
BP GO:0070647 protein modification by small protein conjugation or removal IEP Enrichment
InterPro domains Description Start Stop
IPR008778 Pirin_C_dom 216 326
IPR003829 Pirin_N_dom 62 140
No external refs found!