Sro56_g032590.1 (Contig3029.g24135)

Aliases : Contig3029.g24135

Description : Heat shock factor (HSF)-type, DNA-binding [Interproscan].

Gene families : OG_01_0006166 (OrthoFinder) Phylogenetic Tree(s): OG0006166_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sro56_g032590.1
Cluster	HCCA: Cluster_4

Target	Alias	Description	ECC score	Gene Family Method
Sro10_g008270.1	Contig1.g51	Shock factor protein	0.02	OrthoFinder
Sro16_g011580.1	Contig916.g9595	HSF-type DNA-binding	0.03	OrthoFinder
Sro24_g016420.1	Contig40.g252	HSF-type DNA-binding	0.03	OrthoFinder
Sro95_g049330.1	Contig45.g318	Shock factor protein	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
CC	GO:0018995	host cellular component	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0033643	host cell part	None	Extended
CC	GO:0033646	host intracellular part	None	Extended
CC	GO:0033647	host intracellular organelle	None	Extended
CC	GO:0033648	host intracellular membrane-bounded organelle	None	Extended
CC	GO:0042025	host cell nucleus	IEA	Interproscan
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	IEP	Enrichment
BP	GO:0003333	amino acid transmembrane transport	IEP	Enrichment
MF	GO:0003857	3-hydroxyacyl-CoA dehydrogenase activity	IEP	Enrichment
BP	GO:0006865	amino acid transport	IEP	Enrichment
BP	GO:0015849	organic acid transport	IEP	Enrichment
MF	GO:0046983	protein dimerization activity	IEP	Enrichment
BP	GO:1903825	organic acid transmembrane transport	IEP	Enrichment
BP	GO:1905039	carboxylic acid transmembrane transport	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR000232	HSF_DNA-bd	61	150

External Links

No external refs found!

Sro56_g032590.1 (Contig3029.g24135)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation