Sro566_g167770.1 (Contig3739.g28672)

Aliases : Contig3739.g28672

Description : Fidgetin-like protein 1

Gene families : OG_01_0000074 (OrthoFinder) Phylogenetic Tree(s): OG0000074_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sro566_g167770.1

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00001126.11	tig00001126_g7122.t1	Protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1...	0.04	OrthoFinder
Cpa\|evm.model.tig00021179.32	tig00021179_g19247.t1	Katanin p60 ATPase-containing subunit A1 OS=Arabidopsis thaliana	0.03	OrthoFinder
Cre02.g079300	30786252, VPS4	Vesicle trafficking.endomembrane trafficking.ESCRT...	0.01	OrthoFinder
Cre12.g541300	30792645	Katanin p60 ATPase-containing subunit A1 OS=Arabidopsis thaliana	0.01	OrthoFinder
Cre16.g650151	30777740	Enzyme classification.EC_3 hydrolases.EC_3.6 hydrolase...	0.01	OrthoFinder
Dusal.0318s00001.1	33185642	ATPase, AAA-type, core [Interproscan].	0.02	OrthoFinder
Transcript_contig_59114	59114	ATPase, AAA-type, core [Interproscan].	0.01	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0000045	autophagosome assembly	IEP	Enrichment
CC	GO:0005737	cytoplasm	IEP	Enrichment
BP	GO:0006996	organelle organization	IEP	Enrichment
BP	GO:0007033	vacuole organization	IEP	Enrichment
BP	GO:0008104	protein localization	IEP	Enrichment
BP	GO:0015031	protein transport	IEP	Enrichment
BP	GO:0016043	cellular component organization	IEP	Enrichment
BP	GO:0022607	cellular component assembly	IEP	Enrichment
BP	GO:0033036	macromolecule localization	IEP	Enrichment
BP	GO:0045184	establishment of protein localization	IEP	Enrichment
BP	GO:0070925	organelle assembly	IEP	Enrichment
BP	GO:0071702	organic substance transport	IEP	Enrichment
BP	GO:0071705	nitrogen compound transport	IEP	Enrichment
BP	GO:0071840	cellular component organization or biogenesis	IEP	Enrichment
BP	GO:1905037	autophagosome organization	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR015415	Vps4_C	505	539
IPR041569	AAA_lid_3	458	490
IPR003959	ATPase_AAA_core	301	433

External Links

No external refs found!