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  5. Sro55_g032140.1

Sro55_g032140.1 (Contig4458.g33488)


Aliases : Contig4458.g33488

Description : Zinc finger, RING-type; IBR domain [Interproscan].


Gene families : OG_01_0010702 (OrthoFinder) Phylogenetic Tree(s): OG0010702_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro55_g032140.1
Cluster HCCA: Cluster_205

Target Alias Description ECC score Gene Family Method Actions
Sro1496_g277500.1 Contig2419.g19800 Zinc finger, RING-type [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043631 RNA polyadenylation IEP Enrichment
MF GO:0070566 adenylyltransferase activity IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
InterPro domains Description Start Stop
IPR002867 IBR_dom 115 159
IPR001841 Znf_RING 4 56
No external refs found!