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  5. Sro556_g165970.1

Sro556_g165970.1 (Contig1584.g14388)


Aliases : Contig1584.g14388

Description : Receptor homology region, transmembrane domain- and RING domain-containing protein


Gene families : OG_01_0000005 (OrthoFinder) Phylogenetic Tree(s): OG0000005_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro556_g165970.1
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
PTI_14G02370.1 No alias Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000030 mannosyltransferase activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005681 spliceosomal complex IEP Enrichment
BP GO:0006486 protein glycosylation IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
BP GO:0043413 macromolecule glycosylation IEP Enrichment
BP GO:0048193 Golgi vesicle transport IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
MF GO:0051287 NAD binding IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
MF GO:0070403 NAD+ binding IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
CC GO:0140513 nuclear protein-containing complex IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR001841 Znf_RING 361 403
No external refs found!