1. Home
  2. Species
  3. Seminavis robusta
  4. Sequence
  5. Sro545_g163770.1

Sro545_g163770.1 (Contig1180.g11220)


Aliases : Contig1180.g11220

Description : Protein disulfide isomerase


Gene families : OG_01_0000092 (OrthoFinder) Phylogenetic Tree(s): OG0000092_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro545_g163770.1
Cluster HCCA: Cluster_204

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001038.3 tig00001038_g6513.t1 Protein disulfide isomerase-like 2-2 OS=Oryza sativa... 0.02 OrthoFinder
Cre01.g033550 30788638, PDI2 Protein disulfide-isomerase like 2-1 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cre16.g692751 30777894 Protein disulfide-isomerase 5-1 OS=Arabidopsis thaliana 0.03 OrthoFinder
Cre17.g712850 30781739 No description available 0.01 OrthoFinder
PTI_01G05040.1 No alias Thioredoxin-like domain; Thioredoxin domain [Interproscan]. 0.02 OrthoFinder
Sro1401_g269410.1 Contig1376.g12625 Protein disulfide isomerase 0.04 OrthoFinder
Transcript_contig_59001 59001 Endoplasmic reticulum resident protein 29, C-terminal;... 0.02 OrthoFinder
Transcript_contig_80206 80206 Thioredoxin domain [Interproscan]. 0.01 OrthoFinder
XM_002502991.1 MICPUN_108515, 108515 Thioredoxin domain [Interproscan]. 0.01 OrthoFinder
XM_003063183.1 MicpuC2_48821, 48821 Thioredoxin domain [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Enrichment
MF GO:0004519 endonuclease activity IEP Enrichment
MF GO:0004521 endoribonuclease activity IEP Enrichment
MF GO:0004540 ribonuclease activity IEP Enrichment
MF GO:0004615 phosphomannomutase activity IEP Enrichment
CC GO:0005643 nuclear pore IEP Enrichment
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP Enrichment
MF GO:0008170 N-methyltransferase activity IEP Enrichment
MF GO:0008276 protein methyltransferase activity IEP Enrichment
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Enrichment
BP GO:0009225 nucleotide-sugar metabolic process IEP Enrichment
BP GO:0009226 nucleotide-sugar biosynthetic process IEP Enrichment
BP GO:0009298 GDP-mannose biosynthetic process IEP Enrichment
MF GO:0016278 lysine N-methyltransferase activity IEP Enrichment
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Enrichment
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Enrichment
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016859 cis-trans isomerase activity IEP Enrichment
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Enrichment
CC GO:0017119 Golgi transport complex IEP Enrichment
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Enrichment
MF GO:0018580 nitronate monooxygenase activity IEP Enrichment
BP GO:0019673 GDP-mannose metabolic process IEP Enrichment
MF GO:0042054 histone methyltransferase activity IEP Enrichment
BP GO:0048193 Golgi vesicle transport IEP Enrichment
CC GO:0099023 vesicle tethering complex IEP Enrichment
InterPro domains Description Start Stop
IPR013766 Thioredoxin_domain 47 149
No external refs found!