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  5. Sro538_g162620.1

Sro538_g162620.1 (Contig95.g1103)


Aliases : Contig95.g1103

Description : Putative white-brown complex homolog protein 30


Gene families : OG_01_0000021 (OrthoFinder) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Sro538_g162620.1
Cluster HCCA: Cluster_253

Target Alias Description ECC score Gene Family Method Actions
Cz02g00110.t1 No alias ABC-2 type transporter; ABC transporter-like [Interproscan]. 0.01 OrthoFinder
Cz02g11190.t1 No alias ABC-2 type transporter; ABC transporter-like [Interproscan]. 0.01 OrthoFinder
Cz02g27230.t1 No alias ABC-2 type transporter; ABC transporter-like [Interproscan]. 0.02 OrthoFinder
Cz03g15170.t1 No alias ABC-2 type transporter; ABC transporter-like [Interproscan]. 0.02 OrthoFinder
Cz06g03250.t1 No alias ABC-2 type transporter; ABC transporter-like [Interproscan]. 0.02 OrthoFinder
Cz14g16020.t1 No alias ABC-2 type transporter; ABC transporter-like [Interproscan]. 0.01 OrthoFinder
OT_04G00620.1 No alias ABC-2 type transporter; ABC transporter-like [Interproscan]. 0.02 OrthoFinder
OT_14G01920.1 No alias ABC-2 type transporter [Interproscan]. 0.02 OrthoFinder
PTI_02G01550.1 No alias ABC transporter-like; ABC-2 type transporter [Interproscan]. 0.01 OrthoFinder
PTI_02G01560.1 No alias ABC transporter-like; ABC-2 type transporter [Interproscan]. 0.01 OrthoFinder
PTI_16G01030.1 No alias ABC transporter-like; ABC-2 type transporter [Interproscan]. 0.03 OrthoFinder
PTI_27G00030.1 No alias ABC transporter-like; ABC-2 type transporter [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold441.7 441.7 ABC-2 type transporter; ABC transporter-like [Interproscan]. 0.02 OrthoFinder
SymbC1.scaffold609.10 609.10 ABC-2 type transporter; ABC transporter-like [Interproscan]. 0.03 OrthoFinder
Transcript_contig_89293 89293 ABC-2 type transporter; ABC transporter-like [Interproscan]. 0.02 OrthoFinder
XM_003054877.1 MicpuC2_37849, 37849 ATP-binding cassette superfamily 0.06 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 184 341
IPR013525 ABC_2_trans 478 686
No external refs found!