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  5. Sro531_g161370.1

Sro531_g161370.1 (Contig357.g4813)


Aliases : Contig357.g4813

Description : Hypothetical protein


Gene families : OG_01_0000889 (OrthoFinder) Phylogenetic Tree(s): OG0000889_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro531_g161370.1
Cluster HCCA: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
Sro1524_g279590.1 Contig122.g1372 Hypothetical protein 0.09 OrthoFinder
Sro1708_g292670.1 Contig3919.g30035 Hypothetical protein 0.05 OrthoFinder
Sro179_g078600.1 Contig4117.g31452 Hypothetical protein 0.03 OrthoFinder
Sro2312_g322870.1 Contig481.g6506 Hypothetical protein 0.12 OrthoFinder
Sro2674_g334380.1 Contig1205.g11346 Hypothetical protein 0.02 OrthoFinder
Sro2814_g337720.1 Contig2221.g18460 Hypothetical protein 0.04 OrthoFinder
Sro3022_g342250.1 Contig2390.g19590 Hypothetical protein 0.06 OrthoFinder
Sro3036_g342570.1 Contig4285.g32370 Hypothetical protein 0.07 OrthoFinder
Sro3585_g349380.1 Contig858.g9393 Hypothetical protein 0.06 OrthoFinder
Sro3660_g350040.1 Contig3779.g29019 Hypothetical protein 0.05 OrthoFinder
Sro3674_g350170.1 Contig2046.g17578 Hypothetical protein 0.05 OrthoFinder
Sro396_g134250.1 Contig2592.g21036 Hypothetical protein 0.07 OrthoFinder
Sro396_g134260.1 Contig2592.g21037 Hypothetical protein 0.09 OrthoFinder
Sro4065_g352720.1 Contig3906.g29950 Hypothetical protein 0.06 OrthoFinder
Sro474_g150160.1 Contig2775.g22312 Hypothetical protein 0.04 OrthoFinder
Sro812_g206090.1 Contig1219.g11469 Hypothetical protein 0.04 OrthoFinder
Sro847_g210280.1 Contig4605.g34373 Hypothetical protein 0.05 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP Enrichment
MF GO:0004519 endonuclease activity IEP Enrichment
MF GO:0004520 endodeoxyribonuclease activity IEP Enrichment
MF GO:0004536 deoxyribonuclease activity IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0016888 endodeoxyribonuclease activity, producing 5'-phosphomonoesters IEP Enrichment
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Enrichment
BP GO:0018142 protein-DNA covalent cross-linking IEP Enrichment
BP GO:0018143 nucleic acid-protein covalent cross-linking IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment

No InterPro domains available for this sequence

No external refs found!