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  5. Sro530_g161200.1

Sro530_g161200.1 (Contig4609.g34405)


Aliases : Contig4609.g34405

Description : Helicase


Gene families : OG_01_0014563 (OrthoFinder) Phylogenetic Tree(s): OG0014563_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro530_g161200.1
Cluster HCCA: Cluster_220

Target Alias Description ECC score Gene Family Method Actions
TP14G00160.1 No alias PD-(D/E)XK endonuclease-like domain, AddAB-type [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003964 RNA-directed DNA polymerase activity IEP Enrichment
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006528 asparagine metabolic process IEP Enrichment
BP GO:0006529 asparagine biosynthetic process IEP Enrichment
BP GO:0006952 defense response IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
MF GO:0008452 RNA ligase activity IEP Enrichment
BP GO:0008652 cellular amino acid biosynthetic process IEP Enrichment
BP GO:0009066 aspartate family amino acid metabolic process IEP Enrichment
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Enrichment
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Enrichment
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Enrichment
CC GO:0017119 Golgi transport complex IEP Enrichment
CC GO:0030008 TRAPP complex IEP Enrichment
BP GO:0032259 methylation IEP Enrichment
MF GO:0034061 DNA polymerase activity IEP Enrichment
CC GO:0099023 vesicle tethering complex IEP Enrichment
BP GO:1901607 alpha-amino acid biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR038726 PDDEXK_AddAB-type 93 391
No external refs found!