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  5. Sro52_g030940.1

Sro52_g030940.1 (Contig3190.g25177)


Aliases : Contig3190.g25177

Description : Leucine Rich Repeat


Gene families : OG_01_0000035 (OrthoFinder) Phylogenetic Tree(s): OG0000035_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro52_g030940.1
Cluster HCCA: Cluster_306

Target Alias Description ECC score Gene Family Method Actions
Sro1236_g255140.1 Contig1374.g12617 Leucine Rich Repeat 0.02 OrthoFinder
Sro1460_g274600.1 Contig332.g4412 Leucine Rich Repeat 0.04 OrthoFinder
Sro1543_g281110.1 Contig1530.g13907 Leucine Rich Repeat 0.03 OrthoFinder
Sro1566_g282920.1 Contig581.g7349 LRR receptor-like serine threonine-protein kinase At4g08850 0.03 OrthoFinder
Sro2000_g310250.1 Contig1011.g10144 Leucine Rich Repeat 0.02 OrthoFinder
Sro2223_g319710.1 Contig2179.g18196 Leucine Rich Repeat 0.04 OrthoFinder
Sro283_g107690.1 Contig4255.g32200 LRR receptor-like serine threonine-protein kinase At4g08850 0.04 OrthoFinder
Sro283_g107800.1 Contig4255.g32211 Leucine Rich Repeat 0.06 OrthoFinder
Sro32_g020780.1 Contig3715.g28551 Leucine Rich Repeat 0.02 OrthoFinder
Sro32_g020790.1 Contig3715.g28552 LRR receptor-like serine threonine-protein kinase At4g08850-like 0.03 OrthoFinder
Sro32_g021020.1 Contig3715.g28575 Leucine Rich Repeat 0.03 OrthoFinder
Sro337_g120680.1 Contig2800.g22526 Leucine-rich repeat-containing protein 0.03 OrthoFinder
Sro4136_g353110.1 Contig3023.g24105 LRR receptor-like serine threonine-protein kinase 0.03 OrthoFinder
Sro449_g145310.1 Contig3482.g27001 Leucine Rich Repeat 0.04 OrthoFinder
Sro45_g026870.1 Contig2311.g19069 Leucine Rich Repeat 0.08 OrthoFinder
Sro469_g149300.1 Contig2361.g19380 STYKc 0.04 OrthoFinder
Sro526_g160530.1 Contig842.g9298 LRR receptor-like serine threonine-protein kinase 0.03 OrthoFinder
Sro52_g030870.1 Contig3190.g25170 Leucine Rich Repeat 0.05 OrthoFinder
Sro52_g030880.1 Contig3190.g25171 LRR receptor-like serine threonine-protein kinase 0.02 OrthoFinder
Sro52_g030970.1 Contig3190.g25180 Leucine Rich Repeat 0.05 OrthoFinder
Sro52_g031140.1 Contig3190.g25197 Leucine Rich Repeat 0.02 OrthoFinder
Sro52_g031210.1 Contig3190.g25204 Leucine Rich Repeat 0.03 OrthoFinder
Sro52_g031220.1 Contig3190.g25205 Leucine rich repeat 0.03 OrthoFinder
Sro52_g031230.1 Contig3190.g25206 LRR receptor-like serine threonine-protein kinase 0.04 OrthoFinder
Sro578_g169850.1 Contig83.g894 Leucine Rich Repeat 0.03 OrthoFinder
Sro638_g179650.1 Contig628.g7628 Leucine Rich Repeat 0.04 OrthoFinder
Sro73_g040430.1 Contig3929.g30144 Leucine Rich Repeat 0.02 OrthoFinder
Sro74_g040710.1 Contig4700.g34933 Leucine Rich Repeat 0.03 OrthoFinder
Sro787_g202390.1 Contig4626.g34524 Leucine Rich Repeat 0.03 OrthoFinder
Sro895_g217150.1 Contig1937.g16657 Leucine Rich Repeat 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005337 nucleoside transmembrane transporter activity IEP Enrichment
BP GO:0015858 nucleoside transport IEP Enrichment
BP GO:0015931 nucleobase-containing compound transport IEP Enrichment
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Enrichment
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP Enrichment
MF GO:0016972 thiol oxidase activity IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
BP GO:1901264 carbohydrate derivative transport IEP Enrichment
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Enrichment
BP GO:1901642 nucleoside transmembrane transport IEP Enrichment

No InterPro domains available for this sequence

No external refs found!