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  5. Sro52_g030890.1

Sro52_g030890.1 (Contig3190.g25172)


Aliases : Contig3190.g25172

Description : Leucine Rich Repeat


Gene families : OG_01_0000035 (OrthoFinder) Phylogenetic Tree(s): OG0000035_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro52_g030890.1
Cluster HCCA: Cluster_64

Target Alias Description ECC score Gene Family Method Actions
Sro1581_g283800.1 Contig585.g7355 Leucine Rich Repeat 0.05 OrthoFinder
Sro283_g107800.1 Contig4255.g32211 Leucine Rich Repeat 0.03 OrthoFinder
Sro302_g112200.1 Contig378.g5078 LRR receptor-like serine threonine-protein kinase 0.03 OrthoFinder
Sro449_g145320.1 Contig3482.g27002 Leucine Rich Repeat 0.03 OrthoFinder
Sro469_g149290.1 Contig2361.g19379 Leucine Rich Repeat 0.04 OrthoFinder
Sro52_g030870.1 Contig3190.g25170 Leucine Rich Repeat 0.03 OrthoFinder
Sro52_g031200.1 Contig3190.g25203 LRR receptor-like serine threonine-protein kinase 0.03 OrthoFinder
Sro74_g040710.1 Contig4700.g34933 Leucine Rich Repeat 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Enrichment
MF GO:0003847 1-alkyl-2-acetylglycerophosphocholine esterase activity IEP Enrichment
MF GO:0004673 protein histidine kinase activity IEP Enrichment
BP GO:0006820 anion transport IEP Enrichment
BP GO:0016042 lipid catabolic process IEP Enrichment
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Enrichment
MF GO:0052689 carboxylic ester hydrolase activity IEP Enrichment
MF GO:0070569 uridylyltransferase activity IEP Enrichment
MF GO:0140299 small molecule sensor activity IEP Enrichment

No InterPro domains available for this sequence

No external refs found!