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  5. Sro529_g161100.1

Sro529_g161100.1 (Contig4737.g35132)


Aliases : Contig4737.g35132

Description : Helicase


Gene families : OG_01_0000030 (OrthoFinder) Phylogenetic Tree(s): OG0000030_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro529_g161100.1
Cluster HCCA: Cluster_180

Target Alias Description ECC score Gene Family Method Actions
Cz01g46260.t1 No alias Helicase-associated [Interproscan]. 0.01 OrthoFinder
Cz16g02160.t1 No alias Helicase-associated [Interproscan]. 0.01 OrthoFinder
Sro1568_g283060.1 Contig717.g8279 Helicase 0.03 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8499871.1_8824 KAA8499871 Helicase-associated [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004519 endonuclease activity IEP Enrichment
MF GO:0004521 endoribonuclease activity IEP Enrichment
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Enrichment
MF GO:0004540 ribonuclease activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005681 spliceosomal complex IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
MF GO:0016409 palmitoyltransferase activity IEP Enrichment
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Enrichment
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR005114 Helicase_assoc 165 226
IPR005114 Helicase_assoc 85 147
IPR005114 Helicase_assoc 20 80
No external refs found!