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  5. Sro527_g160590.2

Sro527_g160590.2


Description : tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal [Interproscan].


Gene families : OG_01_0004586 (OrthoFinder) Phylogenetic Tree(s): OG0004586_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro527_g160590.2
Cluster HCCA: Cluster_262

Target Alias Description ECC score Gene Family Method Actions
Transcript_contig_68689 68689 Hypothetical protein 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Enrichment
BP GO:0002097 tRNA wobble base modification IEP Enrichment
BP GO:0002100 tRNA wobble adenosine to inosine editing IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0004000 adenosine deaminase activity IEP Enrichment
BP GO:0006382 adenosine to inosine editing IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006400 tRNA modification IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
MF GO:0008251 tRNA-specific adenosine deaminase activity IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
BP GO:0016553 base conversion or substitution editing IEP Enrichment
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Enrichment
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Enrichment
MF GO:0019239 deaminase activity IEP Enrichment
CC GO:0032993 protein-DNA complex IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
CC GO:0044815 DNA packaging complex IEP Enrichment
InterPro domains Description Start Stop
IPR011063 TilS/TtcA_N 88 253
No external refs found!