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  5. Sro525_g160080.1

Sro525_g160080.1 (Contig3147.g24956)


Aliases : Contig3147.g24956

Description : Putative fatty-acid--CoA ligase FadD21


Gene families : OG_01_0000621 (OrthoFinder) Phylogenetic Tree(s): OG0000621_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro525_g160080.1
Cluster HCCA: Cluster_281

Target Alias Description ECC score Gene Family Method Actions
Sro214_g088820.1 Contig282.g3667 Putative fatty-acid--CoA ligase FadD21 0.04 OrthoFinder
Sro2436_g327600.1 Contig915.g9579 MSMEG_5435/MSMEI_5285 0.03 OrthoFinder
SymbC1.scaffold2811.2 2811.2 AMP-dependent synthetase/ligase [Interproscan]. 0.01 OrthoFinder
XM_003062124.1 MicpuC2_2195, 2195 AMP-dependent synthetase/ligase [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEP Enrichment
InterPro domains Description Start Stop
IPR009081 PP-bd_ACP 644 702
IPR000873 AMP-dep_Synth/Lig 42 494
No external refs found!