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  5. Sro520_g159080.1

Sro520_g159080.1 (Contig2679.g21664)


Aliases : Contig2679.g21664

Description : Low-co2 inducible protein


Gene families : OG_01_0000299 (OrthoFinder) Phylogenetic Tree(s): OG0000299_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro520_g159080.1
Cluster HCCA: Cluster_261

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000718.34 tig00000718_g3709.t1 No description available 0.03 OrthoFinder
Cpa|evm.model.tig00000851.2 tig00000851_g4886.t1 No description available 0.02 OrthoFinder
Cre04.g223250 30791159, LCIE No description available 0.01 OrthoFinder
Cre06.g307500 30779446, LCIC No description available 0.03 OrthoFinder
Cre10.g452800 30790505, LCIB No description available 0.03 OrthoFinder
Cz14g01130.t1 No alias Limiting CO2-inducible protein B/C, beta carbonyic... 0.02 OrthoFinder
Dusal.0153s00007.1 33203322 Limiting CO2-inducible protein B/C, beta carbonyic... 0.02 OrthoFinder
Dusal.0190s00023.1 33189436 Limiting CO2-inducible protein B/C, beta carbonyic... 0.01 OrthoFinder
PTI_01G11220.1 No alias Limiting CO2-inducible protein B/C, beta carbonyic... 0.02 OrthoFinder
PTI_01G11240.1 No alias Limiting CO2-inducible protein B/C, beta carbonyic... 0.04 OrthoFinder
TP01G02290.1 No alias Limiting CO2-inducible protein B/C, beta carbonyic... 0.03 OrthoFinder
Vocar.0030s0054.1 32894574 Limiting CO2-inducible protein B/C, beta carbonyic... 0.02 OrthoFinder
lcl|BLLF01001548.1_cds_GFH19961.1_14438 HaLaN_17001, GFH19961 LCIB_C_CA domain-containing protein 0.02 OrthoFinder
lcl|BLLF01003004.1_cds_GFH26054.1_20531 HaLaN_24135, GFH26054 LCIB_C_CA domain-containing protein 0.02 OrthoFinder
lcl|BLLF01003362.1_cds_GFH27139.1_21616 HaLaN_25411, GFH27139 Hypothetical protein 0.01 OrthoFinder
lcl|LHPG02000016.1_cds_PRW33563.1_3375 PRW33563 Low-CO2 inducible 0.02 OrthoFinder
lcl|LHPG02000017.1_cds_PRW33318.1_3464 PRW33318 Low-CO2 inducible 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003989 acetyl-CoA carboxylase activity IEP Enrichment
MF GO:0004601 peroxidase activity IEP Enrichment
MF GO:0004743 pyruvate kinase activity IEP Enrichment
MF GO:0004751 ribose-5-phosphate isomerase activity IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006090 pyruvate metabolic process IEP Enrichment
BP GO:0006091 generation of precursor metabolites and energy IEP Enrichment
BP GO:0006096 glycolytic process IEP Enrichment
BP GO:0006165 nucleoside diphosphate phosphorylation IEP Enrichment
BP GO:0006631 fatty acid metabolic process IEP Enrichment
BP GO:0006633 fatty acid biosynthetic process IEP Enrichment
BP GO:0006757 ATP generation from ADP IEP Enrichment
BP GO:0006979 response to oxidative stress IEP Enrichment
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP Enrichment
BP GO:0009132 nucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP Enrichment
BP GO:0016052 carbohydrate catabolic process IEP Enrichment
MF GO:0016421 CoA carboxylase activity IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016859 cis-trans isomerase activity IEP Enrichment
MF GO:0016860 intramolecular oxidoreductase activity IEP Enrichment
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Enrichment
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Enrichment
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP Enrichment
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
MF GO:0030955 potassium ion binding IEP Enrichment
MF GO:0031420 alkali metal ion binding IEP Enrichment
BP GO:0032787 monocarboxylic acid metabolic process IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0046031 ADP metabolic process IEP Enrichment
BP GO:0046034 ATP metabolic process IEP Enrichment
BP GO:0046394 carboxylic acid biosynthetic process IEP Enrichment
BP GO:0046939 nucleotide phosphorylation IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
MF GO:0070569 uridylyltransferase activity IEP Enrichment
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Enrichment
BP GO:1901135 carbohydrate derivative metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR040703 LCIB/C_CA 81 299
No external refs found!