Sro51_chlor_g029890.1 (Rpl27)


Aliases : Rpl27

Description : Rpl27


Gene families : OG_01_0000894 (OrthoFinder) Phylogenetic Tree(s): OG0000894_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro51_chlor_g029890.1
Cluster HCCA: Cluster_109

Target Alias Description ECC score Gene Family Method Actions
Cre06.g300800 30778964, PRPL27 50S ribosomal protein L27, chloroplastic OS=Arabidopsis thaliana 0.09 OrthoFinder
Cz08g09200.t1 No alias Ribosomal protein L27 [Interproscan]. 0.06 OrthoFinder
Dusal.1029s00008.1 33196318 Ribosomal protein L27 [Interproscan]. 0.02 OrthoFinder
OT_07G01560.1 No alias Ribosomal protein L27 [Interproscan]. 0.09 OrthoFinder
Sro1328_g263130.1 Contig1099.g10653 Protein L27 0.03 OrthoFinder
TPCG01990.1 No alias Ribosomal protein L27 [Interproscan]. 0.08 OrthoFinder
TPCG03010.1 No alias Ribosomal protein L27 [Interproscan]. 0.07 OrthoFinder
Transcript_contig_89636 89636 Ribosomal protein L27 [Interproscan]. 0.01 OrthoFinder
Vocar.0001s0304.1 32885658 Ribosomal protein L27 [Interproscan]. 0.03 OrthoFinder
XM_002499554.1 MICPUN_56110, 56110 Ribosomal protein L27 (RPL27) 0.04 OrthoFinder
lcl|BLLF01003179.1_cds_GFH26609.1_21086 HaLaN_24785, GFH26609 50S ribosomal protein L27 0.02 OrthoFinder
lcl|LHPG02000008.1_cds_PRW56434.1_9704 PRW56434 50S ribosomal L27 isoform A 0.01 OrthoFinder
lcl|LHPG02000019.1_cds_PRW32583.1_3993 PRW32583 50S ribosomal L27 0.06 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003678 DNA helicase activity IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0003954 NADH dehydrogenase activity IEP Enrichment
MF GO:0003955 NAD(P)H dehydrogenase (quinone) activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Enrichment
CC GO:0009512 cytochrome b6f complex IEP Enrichment
MF GO:0015002 obsolete heme-copper terminal oxidase activity IEP Enrichment
CC GO:0015934 large ribosomal subunit IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Enrichment
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
BP GO:0017038 protein import IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
CC GO:0044391 ribosomal subunit IEP Enrichment
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Enrichment
CC GO:0070069 cytochrome complex IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR001684 Ribosomal_L27 2 37
No external refs found!