1. Home
  2. Species
  3. Seminavis robusta
  4. Sequence
  5. Sro51_chlor_g029560.1

Sro51_chlor_g029560.1 (Rpl29)


Aliases : Rpl29

Description : Rpl29


Gene families : OG_01_0005760 (OrthoFinder) Phylogenetic Tree(s): OG0005760_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro51_chlor_g029560.1
Cluster HCCA: Cluster_109

Target Alias Description ECC score Gene Family Method Actions
Cre06.g259850 30779000, PRPL29 No description available 0.08 OrthoFinder
Cz03g38180.t1 No alias Hypothetical protein 0.07 OrthoFinder
OT_06G01630.1 No alias Ribosomal protein L29/L35 [Interproscan]. 0.06 OrthoFinder
TPCG02500.1 No alias Ribosomal protein L29/L35 [Interproscan]. 0.11 OrthoFinder
XM_002500345.1 MICPUN_56703, 56703 Ribosomal protein L29/L35 [Interproscan]. 0.09 OrthoFinder
XM_003059072.1 MicpuC2_58637, 58637 Ribosomal protein L29/L35 [Interproscan]. 0.05 OrthoFinder
lcl|LHPG02000001.1_cds_PRW60985.1_744 PRW60985 50S ribosomal chloroplastic 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003678 DNA helicase activity IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0003954 NADH dehydrogenase activity IEP Enrichment
MF GO:0003955 NAD(P)H dehydrogenase (quinone) activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Enrichment
CC GO:0009512 cytochrome b6f complex IEP Enrichment
MF GO:0015002 obsolete heme-copper terminal oxidase activity IEP Enrichment
CC GO:0015934 large ribosomal subunit IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Enrichment
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
BP GO:0017038 protein import IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
CC GO:0044391 ribosomal subunit IEP Enrichment
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Enrichment
CC GO:0070069 cytochrome complex IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR001854 Ribosomal_L29/L35 8 63
No external refs found!