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  5. Sro51_chlor_g029530.1

Sro51_chlor_g029530.1 (Rpl22)


Aliases : Rpl22

Description : Rpl22


Gene families : OG_01_0005913 (OrthoFinder) Phylogenetic Tree(s): OG0005913_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro51_chlor_g029530.1
Cluster HCCA: Cluster_109

Target Alias Description ECC score Gene Family Method Actions
Cre13.g580850 30784623 Protein biosynthesis.organelle translation... 0.1 OrthoFinder
Cz08g13130.t1 No alias Ribosomal protein L22/L17 [Interproscan]. 0.08 OrthoFinder
Dusal.0145s00018.1 33195880 Ribosomal protein L22/L17 [Interproscan]. 0.02 OrthoFinder
OT_18G00670.1 No alias Ribosomal protein L22/L17 [Interproscan]. 0.08 OrthoFinder
TPCG02430.1 No alias Ribosomal protein L22/L17 [Interproscan]. 0.19 OrthoFinder
Vocar.0002s0583.1 32890565 Ribosomal protein L22/L17 [Interproscan]. 0.02 OrthoFinder
XM_002501086.1 MICPUN_105354, 105354 Ribosomal protein L22/L17 [Interproscan]. 0.11 OrthoFinder
XM_003064504.1 MicpuC2_30355, 30355 Ribosomal protein L22/L17 [Interproscan]. 0.03 OrthoFinder
lcl|LHPG02000004.1_cds_PRW58926.1_7517 PRW58926 50S ribosomal L22 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003678 DNA helicase activity IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0003954 NADH dehydrogenase activity IEP Enrichment
MF GO:0003955 NAD(P)H dehydrogenase (quinone) activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Enrichment
CC GO:0009512 cytochrome b6f complex IEP Enrichment
MF GO:0015002 obsolete heme-copper terminal oxidase activity IEP Enrichment
CC GO:0015934 large ribosomal subunit IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Enrichment
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
BP GO:0017038 protein import IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
CC GO:0044391 ribosomal subunit IEP Enrichment
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Enrichment
CC GO:0070069 cytochrome complex IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR001063 Ribosomal_L22 9 112
No external refs found!