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  5. Sro51_chlor_g029510.1

Sro51_chlor_g029510.1 (Rps19)


Aliases : Rps19

Description : Rps19


Gene families : OG_01_0001210 (OrthoFinder) Phylogenetic Tree(s): OG0001210_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro51_chlor_g029510.1
Cluster HCCA: Cluster_109

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020830.61 tig00020830_g14444.t1 Protein biosynthesis.cytosolic ribosome.small subunit... 0.01 OrthoFinder
Cre08.g360900 30773772, RPS15 Protein biosynthesis.cytosolic ribosome.small subunit... 0.01 OrthoFinder
Cre08.g375250 30774094, MRPS19 No description available 0.04 OrthoFinder
Cz15g01190.t1 No alias Ribosomal protein S19/S15 [Interproscan]. 0.01 OrthoFinder
CzCPg01310.t1 No alias Ribosomal protein S19/S15 [Interproscan]. 0.12 OrthoFinder
OT_12G02670.1 No alias Ribosomal protein S19/S15 [Interproscan]. 0.02 OrthoFinder
PTI_06G03210.1 No alias Ribosomal protein S19/S15 [Interproscan]. 0.02 OrthoFinder
TP03G03270.1 No alias Ribosomal protein S19/S15 [Interproscan]. 0.01 OrthoFinder
TPCG02390.1 No alias Ribosomal protein S19/S15 [Interproscan]. 0.18 OrthoFinder
Vocar.0021s0199.1 32896013 Ribosomal protein S19/S15 [Interproscan]. 0.01 OrthoFinder
XM_003054821.1 MicpuC2_30685, 30685 Ribosomal protein S19/S15 [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01002576.1_cds_GFH24586.1_19063 HaLaN_22406, GFH24586 S15 ribosomal protein 0.01 OrthoFinder
lcl|LHPG02000015.1_cds_PRW33918.1_2873 PRW33918 40S ribosomal S15 0.01 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8500014.1_8967 KAA8500014 40S ribosomal protein S15 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003678 DNA helicase activity IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0003954 NADH dehydrogenase activity IEP Enrichment
MF GO:0003955 NAD(P)H dehydrogenase (quinone) activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Enrichment
CC GO:0009512 cytochrome b6f complex IEP Enrichment
MF GO:0015002 obsolete heme-copper terminal oxidase activity IEP Enrichment
CC GO:0015934 large ribosomal subunit IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Enrichment
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
BP GO:0017038 protein import IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
CC GO:0044391 ribosomal subunit IEP Enrichment
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Enrichment
CC GO:0070069 cytochrome complex IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR002222 Ribosomal_S19 3 83
No external refs found!