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  5. Sro51_chlor_g029400.1

Sro51_chlor_g029400.1 (Rps16)


Aliases : Rps16

Description : Rps16


Gene families : OG_01_0001483 (OrthoFinder) Phylogenetic Tree(s): OG0001483_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro51_chlor_g029400.1
Cluster HCCA: Cluster_93

Target Alias Description ECC score Gene Family Method Actions
Cre12.g494450 30791769, PRPS16 30S ribosomal protein S16, chloroplastic OS=Staurastrum... 0.01 OrthoFinder
Cz04g32230.t1 No alias Ribosomal protein S16 [Interproscan]. 0.01 OrthoFinder
Dusal.0140s00006.1 33196367 Ribosomal protein S16 [Interproscan]. 0.01 OrthoFinder
OT_16G01850.1 No alias Ribosomal protein S16 [Interproscan]. 0.02 OrthoFinder
SymbC1.scaffold2820.1 2820.1 Ribosomal protein S16 [Interproscan]. 0.03 OrthoFinder
XM_002506300.1 MICPUN_64421, 64421 Ribosomal protein S16 [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0005488 binding IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
CC GO:0032993 protein-DNA complex IEP Enrichment
CC GO:0044815 DNA packaging complex IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR000307 Ribosomal_S16 8 64
No external refs found!