Sro504_g156000.1 (Contig4263.g32266)

Aliases : Contig4263.g32266

Description : Protein ClpB

Gene families : OG_01_0000068 (OrthoFinder) Phylogenetic Tree(s): OG0000068_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sro504_g156000.1
Cluster	HCCA: Cluster_277

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00001416.7	tig00001416_g8954.t1	No description available	0.01	OrthoFinder
EOD28801	No alias	ATPase, AAA-type, core; Clp, N-terminal [Interproscan].	0.02	OrthoFinder
SymbC1.scaffold685.19	685.19	Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA...	0.02	OrthoFinder
Vocar.0014s0261.1	32888665	ClpA/ClpB, AAA lid domain; ATPase, AAA-type, core; Clp,...	0.02	OrthoFinder
lcl\|LHPG02000003.1_cds_PRW59843.1_6514	PRW59843	ATP-dependent chaperone	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003847	1-alkyl-2-acetylglycerophosphocholine esterase activity	IEP	Enrichment
BP	GO:0006629	lipid metabolic process	IEP	Enrichment
BP	GO:0009056	catabolic process	IEP	Enrichment
BP	GO:0016042	lipid catabolic process	IEP	Enrichment
MF	GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	IEP	Enrichment
MF	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	IEP	Enrichment
MF	GO:0051213	dioxygenase activity	IEP	Enrichment
MF	GO:0052689	carboxylic ester hydrolase activity	IEP	Enrichment
BP	GO:1901575	organic substance catabolic process	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR003959	ATPase_AAA_core	633	802
IPR019489	Clp_ATPase_C	808	890
IPR041546	ClpA/ClpB_AAA_lid	498	565
IPR004176	Clp_R_dom	105	143
IPR003959	ATPase_AAA_core	311	474

External Links

No external refs found!