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  5. Sro49_g028630.1

Sro49_g028630.1 (Contig2054.g17613)


Aliases : Contig2054.g17613

Description : Retrotransposon protein


Gene families : OG_01_0000121 (OrthoFinder) Phylogenetic Tree(s): OG0000121_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro49_g028630.1
Cluster HCCA: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
Sro1172_g248930.1 Contig1295.g12030 Hypothetical protein 0.06 OrthoFinder
Sro1340_g264410.1 Contig1391.g12823 Hypothetical protein 0.05 OrthoFinder
Sro1966_g308300.1 Contig1903.g16494 Hypothetical protein 0.05 OrthoFinder
Sro2219_g319590.1 Contig533.g6928 Hypothetical protein 0.03 OrthoFinder
Sro2710_g335230.1 Contig3750.g28727 Hypothetical protein 0.05 OrthoFinder
Sro2710_g335240.1 Contig3750.g28728 Hypothetical protein 0.04 OrthoFinder
Sro2776_g336840.1 Contig650.g7770 Hypothetical protein 0.04 OrthoFinder
Sro2892_g339610.1 Contig1119.g10716 Hypothetical protein 0.06 OrthoFinder
Sro291_g109530.1 Contig4055.g31099 Hypothetical protein 0.03 OrthoFinder
Sro2951_g340920.1 Contig1934.g16653 Retrotransposon protein 0.04 OrthoFinder
Sro3043_g342690.1 Contig2893.g23072 Hypothetical protein 0.03 OrthoFinder
Sro4143_g353170.1 Contig1243.g11622 Hypothetical protein 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004674 protein serine/threonine kinase activity IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment

No InterPro domains available for this sequence

No external refs found!