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  5. Sro49_g028620.1

Sro49_g028620.1 (Contig2054.g17612)


Aliases : Contig2054.g17612

Description : Conserved hypothetical, protein


Gene families : OG_01_0004917 (OrthoFinder) Phylogenetic Tree(s): OG0004917_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro49_g028620.1
Cluster HCCA: Cluster_321

Target Alias Description ECC score Gene Family Method Actions
Transcript_contig_56807 56807 Hypothetical protein 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEP Enrichment
MF GO:0004177 aminopeptidase activity IEP Enrichment
MF GO:0005048 signal sequence binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005869 dynactin complex IEP Enrichment
CC GO:0005875 microtubule associated complex IEP Enrichment
BP GO:0006621 protein retention in ER lumen IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006952 defense response IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0008064 regulation of actin polymerization or depolymerization IEP Enrichment
MF GO:0008238 exopeptidase activity IEP Enrichment
CC GO:0008290 F-actin capping protein complex IEP Enrichment
BP GO:0010639 negative regulation of organelle organization IEP Enrichment
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP Enrichment
MF GO:0016972 thiol oxidase activity IEP Enrichment
CC GO:0017119 Golgi transport complex IEP Enrichment
BP GO:0030001 metal ion transport IEP Enrichment
BP GO:0030832 regulation of actin filament length IEP Enrichment
BP GO:0030833 regulation of actin filament polymerization IEP Enrichment
BP GO:0030834 regulation of actin filament depolymerization IEP Enrichment
BP GO:0030835 negative regulation of actin filament depolymerization IEP Enrichment
BP GO:0030837 negative regulation of actin filament polymerization IEP Enrichment
BP GO:0031333 negative regulation of protein-containing complex assembly IEP Enrichment
BP GO:0032271 regulation of protein polymerization IEP Enrichment
BP GO:0032272 negative regulation of protein polymerization IEP Enrichment
BP GO:0032507 maintenance of protein location in cell IEP Enrichment
BP GO:0032535 regulation of cellular component size IEP Enrichment
BP GO:0032956 regulation of actin cytoskeleton organization IEP Enrichment
BP GO:0032970 regulation of actin filament-based process IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0033043 regulation of organelle organization IEP Enrichment
MF GO:0033218 amide binding IEP Enrichment
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Enrichment
MF GO:0042277 peptide binding IEP Enrichment
BP GO:0043242 negative regulation of protein-containing complex disassembly IEP Enrichment
BP GO:0043244 regulation of protein-containing complex disassembly IEP Enrichment
BP GO:0043254 regulation of protein-containing complex assembly IEP Enrichment
BP GO:0044087 regulation of cellular component biogenesis IEP Enrichment
BP GO:0045185 maintenance of protein location IEP Enrichment
MF GO:0046873 metal ion transmembrane transporter activity IEP Enrichment
MF GO:0046923 ER retention sequence binding IEP Enrichment
BP GO:0048519 negative regulation of biological process IEP Enrichment
BP GO:0048523 negative regulation of cellular process IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
BP GO:0051016 barbed-end actin filament capping IEP Enrichment
BP GO:0051128 regulation of cellular component organization IEP Enrichment
BP GO:0051129 negative regulation of cellular component organization IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051235 maintenance of location IEP Enrichment
BP GO:0051493 regulation of cytoskeleton organization IEP Enrichment
BP GO:0051494 negative regulation of cytoskeleton organization IEP Enrichment
BP GO:0051651 maintenance of location in cell IEP Enrichment
BP GO:0051693 actin filament capping IEP Enrichment
BP GO:0065008 regulation of biological quality IEP Enrichment
BP GO:0072595 maintenance of protein localization in organelle IEP Enrichment
BP GO:0090066 regulation of anatomical structure size IEP Enrichment
CC GO:0099023 vesicle tethering complex IEP Enrichment
BP GO:0110053 regulation of actin filament organization IEP Enrichment
BP GO:1901879 regulation of protein depolymerization IEP Enrichment
BP GO:1901880 negative regulation of protein depolymerization IEP Enrichment
BP GO:1902903 regulation of supramolecular fiber organization IEP Enrichment
BP GO:1902904 negative regulation of supramolecular fiber organization IEP Enrichment
InterPro domains Description Start Stop
IPR000445 HhH_motif 121 144
No external refs found!