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  5. Sro49_g028510.1

Sro49_g028510.1 (Contig2054.g17601)


Aliases : Contig2054.g17601

Description : Stem-loop binding protein


Gene families : OG_01_0002232 (OrthoFinder) Phylogenetic Tree(s): OG0002232_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro49_g028510.1
Cluster HCCA: Cluster_113

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001073.15 tig00001073_g6823.t1 No description available 0.01 OrthoFinder
Cre06.g286800 30779534, HBP1 No description available 0.02 OrthoFinder
EOD13524 No alias Histone RNA hairpin-binding protein, RNA-binding domain... 0.03 OrthoFinder
XM_002507506.1 MICPUN_112727, 112727 Histone RNA hairpin-binding protein, RNA-binding domain... 0.02 OrthoFinder
XM_003056490.1 MicpuC2_55661, 55661 Histone RNA hairpin-binding protein, RNA-binding domain... 0.02 OrthoFinder
XM_003056491.1 MicpuC2_64961, 64961 Histone RNA hairpin-binding protein, RNA-binding domain... 0.02 OrthoFinder
lcl|VRMN01000016.1_cds_KAA8491029.1_9786 KAA8491029 Histone RNA hairpin-binding protein 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000030 mannosyltransferase activity IEP Enrichment
CC GO:0000786 nucleosome IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003887 DNA-directed DNA polymerase activity IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006270 DNA replication initiation IEP Enrichment
BP GO:0006486 protein glycosylation IEP Enrichment
MF GO:0008289 lipid binding IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
MF GO:0016758 hexosyltransferase activity IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
CC GO:0032993 protein-DNA complex IEP Enrichment
MF GO:0034061 DNA polymerase activity IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043413 macromolecule glycosylation IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
CC GO:0044815 DNA packaging complex IEP Enrichment
BP GO:0051259 protein complex oligomerization IEP Enrichment
BP GO:0051260 protein homooligomerization IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
BP GO:0070085 glycosylation IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
InterPro domains Description Start Stop
IPR029344 SLBP_RNA_bind 80 148
No external refs found!