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  5. Sro494_g154270.1

Sro494_g154270.1 (Contig3119.g24792)


Aliases : Contig3119.g24792

Description : Receptor homology region, transmembrane domain- and RING domain-containing protein


Gene families : OG_01_0000005 (OrthoFinder) Phylogenetic Tree(s): OG0000005_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro494_g154270.1
Cluster HCCA: Cluster_154

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000571.7 tig00000571_g2158.t1 Protein degradation.peptide tagging.Ubiquitin... 0.01 OrthoFinder
Cz08g14050.t1 No alias Zinc finger, RING-type [Interproscan]. 0.01 OrthoFinder
Dusal.2652s00001.1 33190881 Zinc finger, RING-H2-type [Interproscan]. 0.01 OrthoFinder
PTI_22G00150.1 No alias Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder
XM_003054990.1 MicpuC2_50363, 50363 Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01001387.1_cds_GFH18974.1_13451 HaLaN_15858, GFH18974 RING-type domain-containing protein 0.02 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8497115.1_844 KAA8497115 E3 ubiquitin-protein ligase RNF38 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0003333 amino acid transmembrane transport IEP Enrichment
MF GO:0004497 monooxygenase activity IEP Enrichment
MF GO:0004806 triglyceride lipase activity IEP Enrichment
BP GO:0006865 amino acid transport IEP Enrichment
BP GO:0015849 organic acid transport IEP Enrichment
MF GO:0016298 lipase activity IEP Enrichment
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016714 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced pteridine as one donor, and incorporation of one atom of oxygen IEP Enrichment
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Enrichment
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Enrichment
MF GO:0046983 protein dimerization activity IEP Enrichment
MF GO:0052689 carboxylic ester hydrolase activity IEP Enrichment
BP GO:1903825 organic acid transmembrane transport IEP Enrichment
BP GO:1905039 carboxylic acid transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR001841 Znf_RING 440 489
No external refs found!