Sro493_g154160.1 (Contig1170.g11148)


Aliases : Contig1170.g11148

Description : Helicase


Gene families : OG_01_0000030 (OrthoFinder) Phylogenetic Tree(s): OG0000030_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro493_g154160.1
Cluster HCCA: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
Sro307_g113190.1 Contig2839.g22789 Helicase 0.03 OrthoFinder
Sro32_g020660.1 Contig3715.g28539 Helicase 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004674 protein serine/threonine kinase activity IEP Enrichment
MF GO:0004842 ubiquitin-protein transferase activity IEP Enrichment
BP GO:0007155 cell adhesion IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
BP GO:0016567 protein ubiquitination IEP Enrichment
MF GO:0019787 ubiquitin-like protein transferase activity IEP Enrichment
BP GO:0022610 biological adhesion IEP Enrichment
MF GO:0030246 carbohydrate binding IEP Enrichment
BP GO:0032446 protein modification by small protein conjugation IEP Enrichment
BP GO:0070647 protein modification by small protein conjugation or removal IEP Enrichment
InterPro domains Description Start Stop
IPR005114 Helicase_assoc 151 212
IPR005114 Helicase_assoc 285 348
IPR005114 Helicase_assoc 84 145
IPR005114 Helicase_assoc 219 279
IPR005114 Helicase_assoc 357 415
No external refs found!