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Aliases : Contig1170.g11142
Description : Leucine Rich Repeat
Gene families : OG_01_0000335 (OrthoFinder) Phylogenetic Tree(s): OG0000335_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Sro493_g154100.1 | |
| Cluster | HCCA: Cluster_45 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Sro1555_g282120.1 | Contig2965.g23558 | Leucine Rich Repeat | 0.02 | OrthoFinder | |
| Sro1765_g296200.1 | Contig1144.g10955 | Leucine Rich Repeat | 0.02 | OrthoFinder | |
| Sro1798_g298240.1 | Contig1745.g15538 | Leucine Rich Repeat | 0.02 | OrthoFinder | |
| Sro213_g088550.2 | No alias | Hypothetical protein | 0.06 | OrthoFinder | |
| Sro266_g103160.1 | Contig1823.g16047 | LRR receptor-like serine threonine-protein kinase | 0.02 | OrthoFinder | |
| Sro2792_g337220.1 | Contig2503.g20501 | Leucine rich repeat | 0.03 | OrthoFinder | |
| Sro3299_g346370.1 | Contig3585.g27692 | LRR receptor-like serine threonine-protein kinase | 0.03 | OrthoFinder | |
| Sro513_g157840.1 | Contig214.g2546 | Leucine Rich Repeat | 0.07 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEP | Enrichment |
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Enrichment |
| BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Enrichment |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | Enrichment |
| BP | GO:0010468 | regulation of gene expression | IEP | Enrichment |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Enrichment |
| CC | GO:0018995 | host cellular component | IEP | Enrichment |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0019222 | regulation of metabolic process | IEP | Enrichment |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | Enrichment |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Enrichment |
| CC | GO:0033643 | host cell part | IEP | Enrichment |
| CC | GO:0033646 | host intracellular part | IEP | Enrichment |
| CC | GO:0033647 | host intracellular organelle | IEP | Enrichment |
| CC | GO:0033648 | host intracellular membrane-bounded organelle | IEP | Enrichment |
| CC | GO:0042025 | host cell nucleus | IEP | Enrichment |
| MF | GO:0043565 | sequence-specific DNA binding | IEP | Enrichment |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | Enrichment |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Enrichment |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | Enrichment |
| MF | GO:0140110 | transcription regulator activity | IEP | Enrichment |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Enrichment |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Enrichment |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001611 | Leu-rich_rpt | 310 | 370 |
| No external refs found! |