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  5. Cpa|evm.model.tig00000227.39

Cpa|evm.model.tig00000227.39 (tig00000227_g19830.t1)


Aliases : tig00000227_g19830.t1

Description : Short-chain dehydrogenase TIC 32, chloroplastic OS=Arabidopsis thaliana


Gene families : OG_01_0000065 (OrthoFinder) Phylogenetic Tree(s): OG0000065_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000227.39
Cluster HCCA: Cluster_196

Target Alias Description ECC score Gene Family Method Actions
OT_04G04490.1 No alias Short-chain dehydrogenase/reductase SDR [Interproscan]. 0.01 OrthoFinder
PTI_03G02450.1 No alias Short-chain dehydrogenase/reductase SDR [Interproscan]. 0.01 OrthoFinder
PTI_04G01050.1 No alias Short-chain dehydrogenase/reductase SDR [Interproscan]. 0.02 OrthoFinder
Sro162_g072690.1 Contig2670.g21605 Dehydrogenase/reductase SDR family member on chromosome X 0.04 OrthoFinder
Sro190_g081950.1 Contig3488.g27070 Dehydrogenase/reductase SDR family member on chromosome X homolog 0.02 OrthoFinder
Sro2726_g335650.1 Contig3579.g27669 Short-chain dehydrogenase TIC 32, chloroplastic 0.02 OrthoFinder
Sro3870_g351610.1 Contig1030.g10252 Short-chain dehydrogenase TIC 32, chloroplastic 0.03 OrthoFinder
Sro3965_g352250.1 Contig1669.g15029 Dehydrogenase/reductase SDR family member on chromosome X homolog 0.02 OrthoFinder
SymbC1.scaffold4.779 4.779 Enoyl-(Acyl carrier protein) reductase; Short-chain... 0.01 OrthoFinder
XM_002502113.1 MICPUN_82103, 82103 Forever young-like oxidoreductase (FEY) 0.03 OrthoFinder
XM_002509219.1 MICPUN_106349, 106349 Short-chain dehydrogenase/reductase SDR [Interproscan]. 0.01 OrthoFinder
lcl|LHPG02000003.1_cds_PRW60169.1_6734 PRW60169 Retinol dehydrogenase 13 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004177 aminopeptidase activity IEP Enrichment
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Enrichment
MF GO:0008238 exopeptidase activity IEP Enrichment
MF GO:0008417 fucosyltransferase activity IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
MF GO:0016209 antioxidant activity IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016757 glycosyltransferase activity IEP Enrichment
MF GO:0016758 hexosyltransferase activity IEP Enrichment
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Enrichment
InterPro domains Description Start Stop
IPR002347 SDR_fam 40 168
No external refs found!