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  5. Sro492_g153750.1

Sro492_g153750.1 (Contig2481.g20301)


Aliases : Contig2481.g20301

Description : Zinc ion binding


Gene families : OG_01_0000005 (OrthoFinder) Phylogenetic Tree(s): OG0000005_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro492_g153750.1
Cluster HCCA: Cluster_107

Target Alias Description ECC score Gene Family Method Actions
Cz09g32200.t1 No alias Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder
EOD09224 No alias Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder
EOD36873 No alias Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder
OT_10G02410.1 No alias Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder
PTI_10G01940.1 No alias Zinc finger, RING-type [Interproscan]. 0.04 OrthoFinder
PTI_10G01950.1 No alias Zinc finger, RING-type [Interproscan]. 0.04 OrthoFinder
PTI_21G01960.1 No alias Zinc finger, RING-type [Interproscan]. 0.04 OrthoFinder
Sro1229_g254480.1 Contig3654.g28212 Protein ligase Arkadia 0.04 OrthoFinder
TP16G00120.1 No alias Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder
XM_002503238.1 MICPUN_101076, 101076 Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01001468.1_cds_GFH19468.1_13945 HaLaN_16418, GFH19468 RING-type domain-containing protein 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Enrichment
BP GO:0000097 sulfur amino acid biosynthetic process IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0004089 carbonate dehydratase activity IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
BP GO:0006534 cysteine metabolic process IEP Enrichment
BP GO:0006535 cysteine biosynthetic process from serine IEP Enrichment
BP GO:0006563 L-serine metabolic process IEP Enrichment
BP GO:0006777 Mo-molybdopterin cofactor biosynthetic process IEP Enrichment
BP GO:0006790 sulfur compound metabolic process IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
MF GO:0008374 O-acyltransferase activity IEP Enrichment
BP GO:0008652 cellular amino acid biosynthetic process IEP Enrichment
MF GO:0009001 serine O-acetyltransferase activity IEP Enrichment
BP GO:0009069 serine family amino acid metabolic process IEP Enrichment
BP GO:0009070 serine family amino acid biosynthetic process IEP Enrichment
BP GO:0016053 organic acid biosynthetic process IEP Enrichment
MF GO:0016412 serine O-acyltransferase activity IEP Enrichment
MF GO:0016413 O-acetyltransferase activity IEP Enrichment
MF GO:0016835 carbon-oxygen lyase activity IEP Enrichment
MF GO:0016836 hydro-lyase activity IEP Enrichment
CC GO:0019008 molybdopterin synthase complex IEP Enrichment
BP GO:0019344 cysteine biosynthetic process IEP Enrichment
BP GO:0019720 Mo-molybdopterin cofactor metabolic process IEP Enrichment
BP GO:0043545 molybdopterin cofactor metabolic process IEP Enrichment
BP GO:0044272 sulfur compound biosynthetic process IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
BP GO:0046394 carboxylic acid biosynthetic process IEP Enrichment
BP GO:0051189 prosthetic group metabolic process IEP Enrichment
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901605 alpha-amino acid metabolic process IEP Enrichment
BP GO:1901607 alpha-amino acid biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR001841 Znf_RING 169 213
No external refs found!