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  5. Sro489_g153330.1

Sro489_g153330.1 (Contig402.g5442)


Aliases : Contig402.g5442

Description : Hypothetical protein


Gene families : OG_01_0000045 (OrthoFinder) Phylogenetic Tree(s): OG0000045_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro489_g153330.1
Cluster HCCA: Cluster_152

Target Alias Description ECC score Gene Family Method Actions
Sro1283_g259110.1 Contig1308.g12124 Hypothetical protein 0.03 OrthoFinder
Sro145_g067280.1 Contig3646.g28174 Hypothetical protein 0.02 OrthoFinder
Sro1826_g300150.1 Contig1209.g11359 Hypothetical protein 0.01 OrthoFinder
Sro2184_g318100.1 Contig1506.g13760 Hypothetical protein 0.03 OrthoFinder
Sro2804_g337440.1 Contig2399.g19647 Hypothetical protein 0.03 OrthoFinder
Sro2868_g339040.1 Contig4519.g33863 Hypothetical protein 0.03 OrthoFinder
Sro2878_g339180.1 Contig4091.g31273 Hypothetical protein 0.03 OrthoFinder
Sro312_g114470.1 Contig2832.g22692 CRAL-TRIO lipid binding domain [Interproscan]. 0.02 OrthoFinder
Sro320_g116450.1 Contig3665.g28306 Hypothetical protein 0.01 OrthoFinder
Sro534_g161811.1 No alias CRAL-TRIO lipid binding domain [Interproscan]. 0.03 OrthoFinder
Sro788_g202430.1 Contig3902.g29924 Hypothetical protein 0.04 OrthoFinder
Sro788_g202440.1 Contig3902.g29925 Hypothetical protein 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP Enrichment
BP GO:0016567 protein ubiquitination IEP Enrichment
CC GO:0018995 host cellular component IEP Enrichment
MF GO:0019787 ubiquitin-like protein transferase activity IEP Enrichment
BP GO:0030001 metal ion transport IEP Enrichment
BP GO:0032446 protein modification by small protein conjugation IEP Enrichment
CC GO:0033643 host cell part IEP Enrichment
CC GO:0033646 host intracellular part IEP Enrichment
CC GO:0033647 host intracellular organelle IEP Enrichment
CC GO:0033648 host intracellular membrane-bounded organelle IEP Enrichment
CC GO:0042025 host cell nucleus IEP Enrichment
BP GO:0070647 protein modification by small protein conjugation or removal IEP Enrichment

No InterPro domains available for this sequence

No external refs found!