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  5. Sro476_g150560.1

Sro476_g150560.1 (Contig4641.g34588)


Aliases : Contig4641.g34588

Description : Hypothetical protein


Gene families : OG_01_0000121 (OrthoFinder) Phylogenetic Tree(s): OG0000121_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro476_g150560.1
Cluster HCCA: Cluster_338

Target Alias Description ECC score Gene Family Method Actions
Sro1172_g248930.1 Contig1295.g12030 Hypothetical protein 0.04 OrthoFinder
Sro1340_g264410.1 Contig1391.g12823 Hypothetical protein 0.04 OrthoFinder
Sro1587_g284220.1 Contig878.g9432 Retrotransposon protein 0.06 OrthoFinder
Sro1587_g284230.1 Contig878.g9433 Hypothetical protein 0.07 OrthoFinder
Sro1587_g284240.1 Contig878.g9434 Hypothetical protein 0.04 OrthoFinder
Sro1687_g291190.1 Contig3941.g30218 Retrotransposon protein 0.03 OrthoFinder
Sro168_g074640.1 Contig1642.g14795 Hypothetical protein 0.04 OrthoFinder
Sro1966_g308300.1 Contig1903.g16494 Hypothetical protein 0.07 OrthoFinder
Sro2313_g322880.1 Contig2128.g17959 Retrotransposon protein 0.03 OrthoFinder
Sro2671_g334300.1 Contig3506.g27168 Hypothetical protein 0.03 OrthoFinder
Sro291_g109520.1 Contig4055.g31098 Hypothetical protein 0.04 OrthoFinder
Sro2951_g340920.1 Contig1934.g16653 Retrotransposon protein 0.06 OrthoFinder
Sro3370_g347320.1 Contig805.g8992 Hypothetical protein 0.03 OrthoFinder
Sro3904_g351810.1 Contig683.g7972 Hypothetical protein 0.03 OrthoFinder
Sro4143_g353170.1 Contig1243.g11622 Hypothetical protein 0.03 OrthoFinder
Sro494_g154220.1 Contig3119.g24787 Hypothetical protein 0.04 OrthoFinder
Sro66_g037090.1 Contig399.g5379 Retrotransposon protein 0.04 OrthoFinder
Sro66_g037110.1 Contig399.g5381 Hypothetical protein 0.04 OrthoFinder
Sro730_g193960.1 Contig80.g828 Hypothetical protein 0.04 OrthoFinder
Sro833_g208530.1 Contig120.g1359 Retrotransposon protein 0.04 OrthoFinder
Sro833_g208550.1 Contig120.g1361 Retrotransposon protein 0.04 OrthoFinder
Sro833_g208560.1 Contig120.g1362 Retrotransposon protein 0.05 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP Enrichment
MF GO:0003678 DNA helicase activity IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
MF GO:0004594 pantothenate kinase activity IEP Enrichment
BP GO:0006164 purine nucleotide biosynthetic process IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
BP GO:0009152 purine ribonucleotide biosynthetic process IEP Enrichment
BP GO:0009260 ribonucleotide biosynthetic process IEP Enrichment
BP GO:0015936 coenzyme A metabolic process IEP Enrichment
BP GO:0015937 coenzyme A biosynthetic process IEP Enrichment
BP GO:0032200 telomere organization IEP Enrichment
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0033866 nucleoside bisphosphate biosynthetic process IEP Enrichment
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0034030 ribonucleoside bisphosphate biosynthetic process IEP Enrichment
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0034033 purine nucleoside bisphosphate biosynthetic process IEP Enrichment
BP GO:0042592 homeostatic process IEP Enrichment
BP GO:0046390 ribose phosphate biosynthetic process IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
BP GO:0060249 anatomical structure homeostasis IEP Enrichment
BP GO:0065008 regulation of biological quality IEP Enrichment
BP GO:0072522 purine-containing compound biosynthetic process IEP Enrichment

No InterPro domains available for this sequence

No external refs found!