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  5. Sro46_g027270.1

Sro46_g027270.1 (Contig1636.g14717)


Aliases : Contig1636.g14717

Description : Pyruvate carboxylase


Gene families : OG_01_0000176 (OrthoFinder) Phylogenetic Tree(s): OG0000176_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro46_g027270.1
Cluster HCCA: Cluster_107

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000133.42 tig00000133_g7706.t1 Enzyme classification.EC_6 ligases.EC_6.4 ligase forming... 0.03 OrthoFinder
Cpa|evm.model.tig00000133.43 tig00000133_g7706.t1 Enzyme classification.EC_6 ligases.EC_6.4 ligase forming... 0.02 OrthoFinder
Cre08.g359350 30773866 Lipid metabolism.fatty acid synthesis.acetyl-CoA... 0.02 OrthoFinder
Cz04g02090.t1 No alias Biotin carboxylase, C-terminal; Carbamoyl-phosphate... 0.01 OrthoFinder
Cz13g10110.t1 No alias Carbamoyl-phosphate synthetase large subunit-like,... 0.02 OrthoFinder
Dusal.0200s00015.1 33197052 Carbamoyl-phosphate synthetase large subunit-like,... 0.04 OrthoFinder
EOD28783 No alias Pyruvate carboxylase [Ensembl]. 0.01 OrthoFinder
EOD39331 No alias Methylcrotonoyl-CoA carboxylase [Ensembl]. 0.01 OrthoFinder
PTI_21G02660.1 No alias Biotin/lipoyl attachment; Biotin carboxylase-like,... 0.03 OrthoFinder
SymbC1.scaffold4.1754 4.1754 Biotin/lipoyl attachment; Carbamoyl-phosphate synthetase... 0.03 OrthoFinder
Transcript_contig_89882 89882 Biotin carboxylase, C-terminal; Biotin carboxylase-like,... 0.01 OrthoFinder
lcl|BLLF01000208.1_cds_GFH09088.1_3565 HaLaN_04167, GFH09088 Biotin carboxylase 0.03 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8497406.1_1135 KAA8497406 Propionyl-CoA carboxylase alpha chain, mitochondrial 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004329 formate-tetrahydrofolate ligase activity IEP Enrichment
MF GO:0004356 glutamate-ammonia ligase activity IEP Enrichment
MF GO:0004807 triose-phosphate isomerase activity IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006541 glutamine metabolic process IEP Enrichment
BP GO:0006542 glutamine biosynthetic process IEP Enrichment
BP GO:0008652 cellular amino acid biosynthetic process IEP Enrichment
BP GO:0009064 glutamine family amino acid metabolic process IEP Enrichment
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Enrichment
BP GO:0016053 organic acid biosynthetic process IEP Enrichment
MF GO:0016211 ammonia ligase activity IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0016860 intramolecular oxidoreductase activity IEP Enrichment
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Enrichment
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Enrichment
MF GO:0030151 molybdenum ion binding IEP Enrichment
BP GO:0044283 small molecule biosynthetic process IEP Enrichment
BP GO:0046394 carboxylic acid biosynthetic process IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
MF GO:0070569 uridylyltransferase activity IEP Enrichment
BP GO:1901605 alpha-amino acid metabolic process IEP Enrichment
BP GO:1901607 alpha-amino acid biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR005482 Biotin_COase_C 424 531
IPR000891 PYR_CT 636 905
IPR005481 BC-like_N 84 193
IPR000089 Biotin_lipoyl 1221 1287
IPR005479 CbamoylP_synth_lsu-like_ATP-bd 200 408
IPR003379 Carboxylase_cons_dom 931 969
IPR003379 Carboxylase_cons_dom 1007 1170
No external refs found!