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  5. Sro469_g149270.1

Sro469_g149270.1 (Contig2361.g19377)


Aliases : Contig2361.g19377

Description : Leucine Rich Repeat


Gene families : OG_01_0000541 (OrthoFinder) Phylogenetic Tree(s): OG0000541_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro469_g149270.1
Cluster HCCA: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
Sro1480_g276150.1 Contig3471.g26917 Hypothetical protein 0.03 OrthoFinder
Sro5_g004460.1 Contig4001.g30761 LRR receptor-like serine threonine-protein kinase 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Enrichment
BP GO:0002097 tRNA wobble base modification IEP Enrichment
BP GO:0002100 tRNA wobble adenosine to inosine editing IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0004000 adenosine deaminase activity IEP Enrichment
MF GO:0004540 ribonuclease activity IEP Enrichment
MF GO:0005507 copper ion binding IEP Enrichment
BP GO:0006382 adenosine to inosine editing IEP Enrichment
BP GO:0006400 tRNA modification IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
MF GO:0008251 tRNA-specific adenosine deaminase activity IEP Enrichment
BP GO:0016553 base conversion or substitution editing IEP Enrichment
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Enrichment
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Enrichment
MF GO:0019239 deaminase activity IEP Enrichment
CC GO:0032993 protein-DNA complex IEP Enrichment
CC GO:0044815 DNA packaging complex IEP Enrichment
MF GO:0098599 palmitoyl hydrolase activity IEP Enrichment

No InterPro domains available for this sequence

No external refs found!