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  5. Sro465_g148630.1

Sro465_g148630.1 (Contig3955.g30308)


Aliases : Contig3955.g30308

Description : Notchless protein homolog 1


Gene families : OG_01_0002636 (OrthoFinder) Phylogenetic Tree(s): OG0002636_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro465_g148630.1

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000144.74 tig00000144_g9065.t1 Notchless protein homolog OS=Arabidopsis thaliana 0.05 OrthoFinder
Cre01.g000600 30789603 Protein biosynthesis.cytosolic ribosome.large subunit... 0.08 OrthoFinder
Cz11g26190.t1 No alias WD40 repeat; NLE [Interproscan]. 0.05 OrthoFinder
Dusal.0107s00002.1 33192139 NLE; WD40 repeat [Interproscan]. 0.05 OrthoFinder
EOD17778 No alias WD40 repeat; NLE [Interproscan]. 0.04 OrthoFinder
OT_13G00130.1 No alias NLE; WD40 repeat [Interproscan]. 0.06 OrthoFinder
TP12G03400.1 No alias WD40 repeat; NLE [Interproscan]. 0.1 OrthoFinder
XM_002501983.1 MICPUN_81470, 81470 Wd-40 repeat family protein/notchless protein 0.12 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP Enrichment
BP GO:0001510 RNA methylation IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0004674 protein serine/threonine kinase activity IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005730 nucleolus IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
MF GO:0008173 RNA methyltransferase activity IEP Enrichment
MF GO:0008649 rRNA methyltransferase activity IEP Enrichment
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
MF GO:0016435 rRNA (guanine) methyltransferase activity IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
BP GO:0031167 rRNA methylation IEP Enrichment
BP GO:0032259 methylation IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
BP GO:0036265 RNA (guanine-N7)-methylation IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0043414 macromolecule methylation IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
BP GO:0070475 rRNA base methylation IEP Enrichment
BP GO:0070476 rRNA (guanine-N7)-methylation IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:0140102 catalytic activity, acting on a rRNA IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR001680 WD40_repeat 500 537
IPR001680 WD40_repeat 193 230
IPR001680 WD40_repeat 325 361
IPR001680 WD40_repeat 459 495
IPR001680 WD40_repeat 372 452
IPR001680 WD40_repeat 546 581
IPR001680 WD40_repeat 284 320
IPR012972 NLE 87 139
No external refs found!