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  5. Sro464_g148430.1

Sro464_g148430.1 (Contig363.g4891)


Aliases : Contig363.g4891

Description : Rubredoxin


Gene families : OG_01_0003382 (OrthoFinder) Phylogenetic Tree(s): OG0003382_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro464_g148430.1
Cluster HCCA: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020912.23 tig00020912_g15797.t1 Photosynthesis.photophosphorylation.photosystem... 0.02 OrthoFinder
Cre07.g315150 30774709, RBD1 Photosynthesis.photophosphorylation.photosystem... 0.08 OrthoFinder
Cz05g36060.t1 No alias Rubredoxin domain [Interproscan]. 0.05 OrthoFinder
Dusal.0115s00006.1 33201306 Rubredoxin domain [Interproscan]. 0.01 OrthoFinder
EOD14857 No alias Rubredoxin domain [Interproscan]. 0.02 OrthoFinder
OT_07G04580.1 No alias Rubredoxin domain [Interproscan]. 0.05 OrthoFinder
PTI_27G01030.1 No alias Rubredoxin domain [Interproscan]. 0.15 OrthoFinder
TP07G02200.1 No alias Rubredoxin domain [Interproscan]. 0.08 OrthoFinder
XM_002503540.1 MICPUN_60047, 60047 Rubredoxin domain [Interproscan]. 0.02 OrthoFinder
XM_003055498.1 MicpuC2_30901, 30901 Rubredoxin domain [Interproscan]. 0.03 OrthoFinder
lcl|BLLF01003352.1_cds_GFH27109.1_21586 HaLaN_25375, GFH27109 Rubredoxin-like domain-containing protein 0.02 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8499443.1_8396 KAA8499443 Rubredoxin 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004601 peroxidase activity IEP Enrichment
BP GO:0006979 response to oxidative stress IEP Enrichment
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
CC GO:0009507 chloroplast IEP Enrichment
CC GO:0009521 photosystem IEP Enrichment
CC GO:0009523 photosystem II IEP Enrichment
CC GO:0009536 plastid IEP Enrichment
CC GO:0009654 photosystem II oxygen evolving complex IEP Enrichment
BP GO:0010207 photosystem II assembly IEP Enrichment
MF GO:0015035 protein-disulfide reductase activity IEP Enrichment
MF GO:0015036 disulfide oxidoreductase activity IEP Enrichment
BP GO:0015979 photosynthesis IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Enrichment
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016859 cis-trans isomerase activity IEP Enrichment
BP GO:0017038 protein import IEP Enrichment
CC GO:0019898 extrinsic component of membrane IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
MF GO:0046422 violaxanthin de-epoxidase activity IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
CC GO:1990204 oxidoreductase complex IEP Enrichment
InterPro domains Description Start Stop
IPR024935 Rubredoxin_dom 98 146
No external refs found!