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  5. Sro451_g145670.1

Sro451_g145670.1 (Contig1599.g14511)


Aliases : Contig1599.g14511

Description : CRAL-TRIO lipid binding domain [Interproscan].


Gene families : OG_01_0000437 (OrthoFinder) Phylogenetic Tree(s): OG0000437_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro451_g145670.1
Cluster HCCA: Cluster_272

Target Alias Description ECC score Gene Family Method Actions
Sro10_g008310.1 Contig1.g55 CRAL-TRIO lipid binding domain [Interproscan]. 0.04 OrthoFinder
Sro1143_g246030.2 No alias Hypothetical protein 0.04 OrthoFinder
Sro133_g063090.1 Contig2274.g18868 Hypothetical protein 0.03 OrthoFinder
Sro1693_g291630.1 Contig4594.g34330 CRAL-TRIO lipid binding domain [Interproscan]. 0.03 OrthoFinder
Sro1693_g291660.1 Contig4594.g34333 CRAL-TRIO lipid binding domain [Interproscan]. 0.05 OrthoFinder
Sro1775_g296890.1 Contig695.g8119 CRAL-TRIO lipid binding domain [Interproscan]. 0.03 OrthoFinder
Sro1874_g302980.1 Contig3840.g29507 CRAL-TRIO lipid binding domain [Interproscan]. 0.04 OrthoFinder
Sro238_g095600.1 Contig99.g1206 CRAL-TRIO lipid binding domain [Interproscan]. 0.02 OrthoFinder
Sro282_g107600.1 Contig1420.g13103 Hypothetical protein 0.04 OrthoFinder
Sro32_g021090.1 Contig3715.g28582 CRAL-TRIO lipid binding domain [Interproscan]. 0.02 OrthoFinder
Sro377_g130070.1 Contig75.g810 Hypothetical protein 0.03 OrthoFinder
Sro688_g187340.1 Contig1782.g15780 CRAL-TRIO lipid binding domain [Interproscan]. 0.04 OrthoFinder
Sro735_g194890.1 Contig2764.g22261 CRAL-TRIO lipid binding domain [Interproscan]. 0.02 OrthoFinder
Sro769_g199830.1 Contig2367.g19485 CRAL-TRIO lipid binding domain [Interproscan]. 0.04 OrthoFinder
Sro994_g229000.1 Contig3591.g27752 CRAL-TRIO lipid binding domain [Interproscan]. 0.05 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
BP GO:0006066 alcohol metabolic process IEP Enrichment
BP GO:0006355 regulation of transcription, DNA-templated IEP Enrichment
BP GO:0009889 regulation of biosynthetic process IEP Enrichment
BP GO:0010468 regulation of gene expression IEP Enrichment
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Enrichment
CC GO:0018995 host cellular component IEP Enrichment
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0019222 regulation of metabolic process IEP Enrichment
BP GO:0019751 polyol metabolic process IEP Enrichment
MF GO:0020037 heme binding IEP Enrichment
BP GO:0031323 regulation of cellular metabolic process IEP Enrichment
BP GO:0031326 regulation of cellular biosynthetic process IEP Enrichment
CC GO:0033643 host cell part IEP Enrichment
CC GO:0033646 host intracellular part IEP Enrichment
CC GO:0033647 host intracellular organelle IEP Enrichment
CC GO:0033648 host intracellular membrane-bounded organelle IEP Enrichment
CC GO:0042025 host cell nucleus IEP Enrichment
MF GO:0043565 sequence-specific DNA binding IEP Enrichment
BP GO:0043647 inositol phosphate metabolic process IEP Enrichment
BP GO:0044262 cellular carbohydrate metabolic process IEP Enrichment
BP GO:0044282 small molecule catabolic process IEP Enrichment
BP GO:0046164 alcohol catabolic process IEP Enrichment
BP GO:0046174 polyol catabolic process IEP Enrichment
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP Enrichment
BP GO:0046855 inositol phosphate dephosphorylation IEP Enrichment
MF GO:0046906 tetrapyrrole binding IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051252 regulation of RNA metabolic process IEP Enrichment
BP GO:0060255 regulation of macromolecule metabolic process IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
BP GO:0071545 inositol phosphate catabolic process IEP Enrichment
BP GO:0080090 regulation of primary metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0140110 transcription regulator activity IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901616 organic hydroxy compound catabolic process IEP Enrichment
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Enrichment
BP GO:2001141 regulation of RNA biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR001251 CRAL-TRIO_dom 162 242
No external refs found!