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  5. Sro450_g145560.1

Sro450_g145560.1 (Contig271.g3481)


Aliases : Contig271.g3481

Description : Heat stress transcription factor


Gene families : OG_01_0000044 (OrthoFinder) Phylogenetic Tree(s): OG0000044_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Sro450_g145560.1
Cluster HCCA: Cluster_128

Target Alias Description ECC score Gene Family Method Actions
PTI_00G02950.1 No alias Heat shock factor (HSF)-type, DNA-binding [Interproscan]. 0.01 OrthoFinder
PTI_02G01270.1 No alias Heat shock factor (HSF)-type, DNA-binding [Interproscan]. 0.02 OrthoFinder
PTI_23G00640.1 No alias Heat shock factor (HSF)-type, DNA-binding [Interproscan]. 0.03 OrthoFinder
PTI_23G00690.1 No alias Heat shock factor (HSF)-type, DNA-binding [Interproscan]. 0.03 OrthoFinder
Sro1068_g237480.1 Contig852.g9367 Stress transcription factor B-2b 0.04 OrthoFinder
Sro1120_g243330.1 Contig896.g9503 Stress transcription factor A-3 0.04 OrthoFinder
Sro1195_g251410.1 Contig4057.g31107 Shock factor protein 4 0.03 OrthoFinder
Sro1409_g270210.1 Contig1095.g10602 Heat stress transcription factor 0.04 OrthoFinder
Sro146_g067460.1 Contig2363.g19436 Shock factor protein 4 0.03 OrthoFinder
Sro1900_g304250.1 Contig3998.g30694 Stress transcription factor B-2b 0.04 OrthoFinder
Sro1900_g304260.1 Contig3998.g30695 Heat stress transcription factor 0.04 OrthoFinder
Sro234_g094550.1 Contig3223.g25502 Shock factor protein 4 0.04 OrthoFinder
Sro237_g095240.1 Contig1864.g16295 Heat stress transcription factor 0.03 OrthoFinder
Sro248_g098370.1 Contig288.g3771 Heat stress transcription factor 0.04 OrthoFinder
Sro38_g023900.1 Contig1551.g14125 Shock factor protein 2 0.02 OrthoFinder
Sro509_g157090.1 Contig4289.g32402 Shock factor protein 0.02 OrthoFinder
Sro53_g031420.1 Contig1592.g14482 Shock factor protein 0.05 OrthoFinder
Sro599_g173330.1 Contig1154.g11044 Shock factor protein 0.03 OrthoFinder
Sro889_g216580.1 Contig1913.g16523 Stress transcription factor A-3 0.03 OrthoFinder
Sro95_g049370.1 Contig45.g322 Stress transcription factor A 0.03 OrthoFinder
TP05G08480.1 No alias Heat shock factor (HSF)-type, DNA-binding [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
CC GO:0042025 host cell nucleus IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0007165 signal transduction IEP Enrichment
BP GO:0035556 intracellular signal transduction IEP Enrichment
InterPro domains Description Start Stop
IPR000232 HSF_DNA-bd 295 388
No external refs found!