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  5. Sro449_g145380.1

Sro449_g145380.1 (Contig3482.g27008)


Aliases : Contig3482.g27008

Description : Leucine rich repeat


Gene families : OG_01_0000035 (OrthoFinder) Phylogenetic Tree(s): OG0000035_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro449_g145380.1
Cluster HCCA: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
Sro106_g053670.1 Contig1122.g10764 Leucine Rich Repeat 0.03 OrthoFinder
Sro1468_g275210.1 Contig3834.g29487 Leucine Rich Repeat 0.03 OrthoFinder
Sro1606_g285520.1 Contig770.g8706 Leucine Rich Repeat 0.03 OrthoFinder
Sro23_g015930.1 Contig2259.g18743 Leucine Rich Repeat 0.02 OrthoFinder
Sro283_g107740.1 Contig4255.g32205 Leucine Rich Repeat 0.03 OrthoFinder
Sro449_g145370.1 Contig3482.g27007 Leucine Rich Repeat 0.03 OrthoFinder
Sro52_g030860.1 Contig3190.g25169 Leucine Rich Repeat 0.01 OrthoFinder
Sro558_g166320.1 Contig3624.g28030 Leucine Rich Repeat 0.03 OrthoFinder
Sro73_g040430.1 Contig3929.g30144 Leucine Rich Repeat 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP Enrichment
BP GO:0007155 cell adhesion IEP Enrichment
BP GO:0016567 protein ubiquitination IEP Enrichment
MF GO:0019787 ubiquitin-like protein transferase activity IEP Enrichment
BP GO:0022610 biological adhesion IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
MF GO:0030246 carbohydrate binding IEP Enrichment
BP GO:0032446 protein modification by small protein conjugation IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
BP GO:0070647 protein modification by small protein conjugation or removal IEP Enrichment

No InterPro domains available for this sequence

No external refs found!