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  5. Sro449_g145350.1

Sro449_g145350.1 (Contig3482.g27005)


Aliases : Contig3482.g27005

Description : Leucine rich repeat


Gene families : OG_01_0000035 (OrthoFinder) Phylogenetic Tree(s): OG0000035_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro449_g145350.1
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
Sro106_g053670.1 Contig1122.g10764 Leucine Rich Repeat 0.03 OrthoFinder
Sro1086_g239740.1 Contig2506.g20510 Leucine Rich Repeat 0.03 OrthoFinder
Sro10_g008370.1 Contig1.g61 Leucine rich repeat 0.03 OrthoFinder
Sro1331_g263510.1 Contig1733.g15457 Leucine rich repeat N-terminal domain 0.02 OrthoFinder
Sro1543_g281110.1 Contig1530.g13907 Leucine Rich Repeat 0.03 OrthoFinder
Sro283_g107800.1 Contig4255.g32211 Leucine Rich Repeat 0.03 OrthoFinder
Sro302_g112200.1 Contig378.g5078 LRR receptor-like serine threonine-protein kinase 0.03 OrthoFinder
Sro32_g020780.1 Contig3715.g28551 Leucine Rich Repeat 0.03 OrthoFinder
Sro32_g021020.1 Contig3715.g28575 Leucine Rich Repeat 0.03 OrthoFinder
Sro337_g120550.1 Contig2800.g22513 STYKc 0.02 OrthoFinder
Sro378_g130270.1 Contig2744.g22070 STYKc 0.02 OrthoFinder
Sro4136_g353110.1 Contig3023.g24105 LRR receptor-like serine threonine-protein kinase 0.03 OrthoFinder
Sro45_g026870.1 Contig2311.g19069 Leucine Rich Repeat 0.03 OrthoFinder
Sro52_g030970.1 Contig3190.g25180 Leucine Rich Repeat 0.03 OrthoFinder
Sro52_g031140.1 Contig3190.g25197 Leucine Rich Repeat 0.03 OrthoFinder
Sro558_g166310.1 Contig3624.g28029 Leucine Rich Repeat 0.03 OrthoFinder
Sro578_g169850.1 Contig83.g894 Leucine Rich Repeat 0.03 OrthoFinder
Sro755_g197630.1 Contig3465.g26898 Leucine Rich Repeat 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008234 cysteine-type peptidase activity IEP Enrichment
MF GO:0008374 O-acyltransferase activity IEP Enrichment
MF GO:0015298 solute:cation antiporter activity IEP Enrichment
MF GO:0015299 solute:proton antiporter activity IEP Enrichment
BP GO:0048878 chemical homeostasis IEP Enrichment
BP GO:0050801 ion homeostasis IEP Enrichment
BP GO:0055065 metal ion homeostasis IEP Enrichment
BP GO:0055070 copper ion homeostasis IEP Enrichment
BP GO:0055076 transition metal ion homeostasis IEP Enrichment
BP GO:0055080 cation homeostasis IEP Enrichment
BP GO:0098771 inorganic ion homeostasis IEP Enrichment

No InterPro domains available for this sequence

No external refs found!