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  5. Sro443_g144170.1

Sro443_g144170.1 (Contig715.g8263)


Aliases : Contig715.g8263

Description : DIS3-like exonuclease 1


Gene families : OG_01_0000391 (OrthoFinder) Phylogenetic Tree(s): OG0000391_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro443_g144170.1
Cluster HCCA: Cluster_282

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001067.25 tig00001067_g6784.t1 DIS3-like exonuclease 2 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cpa|evm.model.tig00020554.88 tig00020554_g10867.t1 Exosome complex exonuclease RRP44 homolog A... 0.01 OrthoFinder
Cre03.g208100 30787711, RNB1 Inactive exonuclease DIS3L2 OS=Arabidopsis thaliana 0.01 OrthoFinder
PTI_17G02940.1 No alias Ribonuclease II/R; Dis3-like cold-shock domain 2 [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold666.3 666.3 Ribonuclease II/R [Interproscan]. 0.01 OrthoFinder
lcl|LHPG02000006.1_cds_PRW57734.1_8240 PRW57734 DIS3-like exonuclease 1 0.02 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8497181.1_910 KAA8497181 Exosome complex exonuclease RRP44-like A 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0004540 ribonuclease activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0002161 aminoacyl-tRNA editing activity IEP Enrichment
MF GO:0004527 exonuclease activity IEP Enrichment
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Enrichment
MF GO:0004559 alpha-mannosidase activity IEP Enrichment
MF GO:0004560 alpha-L-fucosidase activity IEP Enrichment
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0005996 monosaccharide metabolic process IEP Enrichment
BP GO:0006013 mannose metabolic process IEP Enrichment
BP GO:0006352 DNA-templated transcription, initiation IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
MF GO:0008408 3'-5' exonuclease activity IEP Enrichment
MF GO:0008484 sulfuric ester hydrolase activity IEP Enrichment
BP GO:0009890 negative regulation of biosynthetic process IEP Enrichment
BP GO:0009892 negative regulation of metabolic process IEP Enrichment
BP GO:0010033 response to organic substance IEP Enrichment
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Enrichment
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Enrichment
MF GO:0015923 mannosidase activity IEP Enrichment
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP Enrichment
MF GO:0015928 fucosidase activity IEP Enrichment
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Enrichment
BP GO:0019236 response to pheromone IEP Enrichment
BP GO:0019318 hexose metabolic process IEP Enrichment
BP GO:0031324 negative regulation of cellular metabolic process IEP Enrichment
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Enrichment
MF GO:0035596 methylthiotransferase activity IEP Enrichment
BP GO:0042221 response to chemical IEP Enrichment
BP GO:0045892 negative regulation of transcription, DNA-templated IEP Enrichment
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0048519 negative regulation of biological process IEP Enrichment
BP GO:0048523 negative regulation of cellular process IEP Enrichment
MF GO:0050497 alkylthioltransferase activity IEP Enrichment
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051253 negative regulation of RNA metabolic process IEP Enrichment
BP GO:0051259 protein complex oligomerization IEP Enrichment
BP GO:0051260 protein homooligomerization IEP Enrichment
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Enrichment
MF GO:0052689 carboxylic ester hydrolase activity IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
BP GO:1902679 negative regulation of RNA biosynthetic process IEP Enrichment
BP GO:1903507 negative regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR001900 RNase_II/R 505 863
IPR041505 Dis3_CSD2 407 473
IPR033771 Rrp44_CSD1 273 348
No external refs found!