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  5. Sro443_g143990.1

Sro443_g143990.1 (Contig715.g8245)


Aliases : Contig715.g8245

Description : Ultraviolet-B receptor UVR8


Gene families : OG_01_0000020 (OrthoFinder) Phylogenetic Tree(s): OG0000020_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro443_g143990.1
Cluster HCCA: Cluster_162

Target Alias Description ECC score Gene Family Method Actions
Cre12.g498450 30792845 Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana 0.01 OrthoFinder
Dusal.0032s00021.1 33186657 Regulator of chromosome condensation, RCC1 [Interproscan]. 0.03 OrthoFinder
Dusal.0731s00006.1 33195668 Regulator of chromosome condensation, RCC1; Regulator of... 0.02 OrthoFinder
EOD22027 No alias E3 ubiquitin ligase [Ensembl]. 0.03 OrthoFinder
EOD26777 No alias Regulator of chromosome condensation (RCC1) repeat;... 0.02 OrthoFinder
PTI_30G01200.1 No alias Regulator of chromosome condensation (RCC1) repeat;... 0.03 OrthoFinder
Transcript_contig_10133 10133 Regulator of chromosome condensation, RCC1 [Interproscan]. 0.02 OrthoFinder
Vocar.0001s0860.1 32886041 Regulator of chromosome condensation, RCC1 [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01000950.1_cds_GFH16129.1_10606 HaLaN_12494, GFH16129 Regulator of chromosome condensation, RCC1 [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0001671 ATPase activator activity IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004383 guanylate cyclase activity IEP Enrichment
MF GO:0004721 phosphoprotein phosphatase activity IEP Enrichment
MF GO:0005506 iron ion binding IEP Enrichment
CC GO:0005739 mitochondrion IEP Enrichment
BP GO:0006164 purine nucleotide biosynthetic process IEP Enrichment
BP GO:0006182 cGMP biosynthetic process IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
BP GO:0006790 sulfur compound metabolic process IEP Enrichment
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Enrichment
BP GO:0008535 respiratory chain complex IV assembly IEP Enrichment
BP GO:0009150 purine ribonucleotide metabolic process IEP Enrichment
BP GO:0009152 purine ribonucleotide biosynthetic process IEP Enrichment
BP GO:0009259 ribonucleotide metabolic process IEP Enrichment
BP GO:0009260 ribonucleotide biosynthetic process IEP Enrichment
MF GO:0009975 cyclase activity IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
BP GO:0016226 iron-sulfur cluster assembly IEP Enrichment
BP GO:0016311 dephosphorylation IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016791 phosphatase activity IEP Enrichment
MF GO:0016849 phosphorus-oxygen lyase activity IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Enrichment
BP GO:0017004 cytochrome complex assembly IEP Enrichment
BP GO:0019693 ribose phosphate metabolic process IEP Enrichment
MF GO:0020037 heme binding IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
BP GO:0031163 metallo-sulfur cluster assembly IEP Enrichment
BP GO:0033108 mitochondrial respiratory chain complex assembly IEP Enrichment
BP GO:0033617 mitochondrial cytochrome c oxidase assembly IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
BP GO:0046068 cGMP metabolic process IEP Enrichment
BP GO:0046390 ribose phosphate biosynthetic process IEP Enrichment
MF GO:0046906 tetrapyrrole binding IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
MF GO:0051087 chaperone binding IEP Enrichment
BP GO:0052652 cyclic purine nucleotide metabolic process IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
MF GO:0060590 ATPase regulator activity IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
BP GO:0072522 purine-containing compound biosynthetic process IEP Enrichment
BP GO:1901137 carbohydrate derivative biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR001810 F-box_dom 58 100
IPR000408 Reg_chr_condens 224 265
IPR000408 Reg_chr_condens 553 605
IPR000408 Reg_chr_condens 278 332
IPR000408 Reg_chr_condens 498 549
IPR000408 Reg_chr_condens 335 386
No external refs found!