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  5. Sro441_g143660.1

Sro441_g143660.1 (Contig470.g6380)


Aliases : Contig470.g6380

Description : Extracellular solute-binding protein


Gene families : OG_01_0000402 (OrthoFinder) Phylogenetic Tree(s): OG0000402_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro441_g143660.1
Cluster HCCA: Cluster_64

Target Alias Description ECC score Gene Family Method Actions
Sro1084_g239490.1 Contig3162.g25056 Extracellular solute-binding protein 0.04 OrthoFinder
Sro1105_g241930.1 Contig2574.g20912 Putative amino-acid ABC transporter-binding protein YhdW 0.02 OrthoFinder
Sro1168_g248490.1 Contig1520.g13871 Extracellular solute-binding protein 0.03 OrthoFinder
Sro1292_g259960.1 Contig3668.g28337 Extracellular solute-binding protein 0.03 OrthoFinder
Sro1411_g270440.1 Contig2736.g22026 Extracellular solute-binding protein 0.02 OrthoFinder
Sro1536_g280610.1 Contig2003.g17144 Extracellular solute-binding protein 0.02 OrthoFinder
Sro1903_g304520.1 Contig4361.g32859 Putative amino-acid ABC transporter-binding protein YhdW 0.02 OrthoFinder
Sro238_g095580.1 Contig99.g1204 Extracellular solute-binding protein 0.04 OrthoFinder
Sro269_g104120.1 Contig1337.g12333 Extracellular solute-binding protein 0.03 OrthoFinder
Sro3494_g348610.1 Contig3168.g25076 Extracellular solute-binding protein 0.05 OrthoFinder
Sro474_g150170.2 No alias Hypothetical protein 0.04 OrthoFinder
Sro474_g150180.1 Contig2775.g22314 Putative amino-acid ABC transporter-binding protein YhdW 0.04 OrthoFinder
Sro73_g040260.1 Contig3929.g30127 Putative amino-acid ABC transporter-binding protein YhdW 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Enrichment
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
MF GO:0004312 fatty acid synthase activity IEP Enrichment
MF GO:0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity IEP Enrichment
BP GO:0006633 fatty acid biosynthetic process IEP Enrichment
BP GO:0006753 nucleoside phosphate metabolic process IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
BP GO:0009117 nucleotide metabolic process IEP Enrichment
BP GO:0009165 nucleotide biosynthetic process IEP Enrichment
BP GO:0009187 cyclic nucleotide metabolic process IEP Enrichment
BP GO:0009190 cyclic nucleotide biosynthetic process IEP Enrichment
CC GO:0018995 host cellular component IEP Enrichment
CC GO:0033643 host cell part IEP Enrichment
CC GO:0033646 host intracellular part IEP Enrichment
CC GO:0033647 host intracellular organelle IEP Enrichment
CC GO:0033648 host intracellular membrane-bounded organelle IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
BP GO:0035556 intracellular signal transduction IEP Enrichment
CC GO:0042025 host cell nucleus IEP Enrichment
MF GO:0043565 sequence-specific DNA binding IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Enrichment
BP GO:0090407 organophosphate biosynthetic process IEP Enrichment
MF GO:0140110 transcription regulator activity IEP Enrichment
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR001638 Solute-binding_3/MltF_N 629 722
IPR001638 Solute-binding_3/MltF_N 343 525
No external refs found!