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  5. Sro441_g143600.1

Sro441_g143600.1 (Contig470.g6374)


Aliases : Contig470.g6374

Description : Extracellular solute-binding protein


Gene families : OG_01_0000402 (OrthoFinder) Phylogenetic Tree(s): OG0000402_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro441_g143600.1
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
Sro1903_g304520.1 Contig4361.g32859 Putative amino-acid ABC transporter-binding protein YhdW 0.02 OrthoFinder
Sro282_g107620.1 Contig1420.g13105 Extracellular solute-binding protein 0.02 OrthoFinder
Sro28_g018550.1 Contig404.g5464 Extracellular solute-binding protein 0.03 OrthoFinder
Sro3308_g346510.1 Contig4509.g33819 Hypothetical protein 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0009166 nucleotide catabolic process IEP Enrichment
MF GO:0015298 solute:cation antiporter activity IEP Enrichment
MF GO:0015299 solute:proton antiporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR001638 Solute-binding_3/MltF_N 318 519
No external refs found!