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  5. Sro435_g142380.1

Sro435_g142380.1 (Contig492.g6644)


Aliases : Contig492.g6644

Description : Leucine Rich Repeat


Gene families : OG_01_0000159 (OrthoFinder) Phylogenetic Tree(s): OG0000159_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro435_g142380.1
Cluster HCCA: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
Sro1104_g241840.1 Contig4546.g33970 Leucine Rich Repeat 0.03 OrthoFinder
Sro1113_g242620.1 Contig761.g8636 Leucine Rich Repeat 0.05 OrthoFinder
Sro1113_g242630.1 Contig761.g8637 Leucine Rich Repeat 0.02 OrthoFinder
Sro1817_g299560.1 Contig1204.g11343 Leucine Rich Repeat 0.02 OrthoFinder
Sro186_g080590.1 Contig266.g3340 Leucine Rich Repeat 0.02 OrthoFinder
Sro186_g080690.1 Contig266.g3350 Leucine Rich Repeat 0.03 OrthoFinder
Sro186_g080700.1 Contig266.g3351 Leucine Rich Repeat 0.04 OrthoFinder
Sro195_g083170.2 No alias Hypothetical protein 0.04 OrthoFinder
Sro199_g084530.1 Contig257.g3191 Leucine Rich Repeat 0.03 OrthoFinder
Sro2120_g315390.1 Contig3476.g26953 Leucine Rich Repeat 0.02 OrthoFinder
Sro2120_g315410.1 Contig3476.g26955 Leucine Rich Repeat 0.02 OrthoFinder
Sro320_g116580.1 Contig3665.g28319 Leucine Rich Repeat 0.03 OrthoFinder
Sro351_g124010.1 Contig4381.g32955 Leucine Rich Repeat 0.05 OrthoFinder
Sro496_g154670.1 Contig3388.g26497 Leucine Rich Repeat 0.02 OrthoFinder
Sro614_g175770.1 Contig1589.g14431 Leucine Rich Repeat 0.04 OrthoFinder
Sro820_g207300.1 Contig34.g212 Leucine rich repeat N-terminal domain 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment

No InterPro domains available for this sequence

No external refs found!