1. Home
  2. Species
  3. Seminavis robusta
  4. Sequence
  5. Sro434_g142010.1

Sro434_g142010.1 (Contig783.g8758)


Aliases : Contig783.g8758

Description : Propionyl-CoA carboxylase, biotin carboxylase and biotin-carboxyl carrier subunit


Gene families : OG_01_0000176 (OrthoFinder) Phylogenetic Tree(s): OG0000176_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro434_g142010.1
Cluster HCCA: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
PTI_03G04110.1 No alias Biotin/lipoyl attachment; Biotin carboxylase,... 0.02 OrthoFinder
PTI_23G01920.1 No alias Biotin/lipoyl attachment; Biotin carboxylase-like,... 0.07 OrthoFinder
PTI_26G00480.1 No alias Biotin/lipoyl attachment; Biotin carboxylase-like,... 0.09 OrthoFinder
TP19G00190.1 No alias Carbamoyl-phosphate synthetase large subunit-like,... 0.05 OrthoFinder
TP19G00200.1 No alias Carbamoyl-phosphate synthetase large subunit-like,... 0.07 OrthoFinder
Transcript_contig_53848 53848 Biotin carboxylase-like, N-terminal domain;... 0.01 OrthoFinder
Transcript_contig_54681 54681 Biotin carboxylase, C-terminal; Carboxyltransferase... 0.01 OrthoFinder
Transcript_contig_55755 55755 Biotin carboxylase, C-terminal; Propionyl-coenzyme A... 0.02 OrthoFinder
lcl|LHPG02000026.1_cds_PRW18307.1_5882 PRW18307 Propionyl-carboxylase alpha mitochondrial 0.02 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8497406.1_1135 KAA8497406 Propionyl-CoA carboxylase alpha chain, mitochondrial 0.04 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8494651.1_3181 KAA8494651 Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005319 lipid transporter activity IEP Enrichment
MF GO:0005342 organic acid transmembrane transporter activity IEP Enrichment
MF GO:0005548 phospholipid transporter activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005887 integral component of plasma membrane IEP Enrichment
BP GO:0006811 ion transport IEP Enrichment
BP GO:0006869 lipid transport IEP Enrichment
BP GO:0007009 plasma membrane organization IEP Enrichment
MF GO:0008028 monocarboxylic acid transmembrane transporter activity IEP Enrichment
MF GO:0008410 CoA-transferase activity IEP Enrichment
MF GO:0008514 organic anion transmembrane transporter activity IEP Enrichment
MF GO:0010181 FMN binding IEP Enrichment
MF GO:0015075 ion transmembrane transporter activity IEP Enrichment
MF GO:0015129 lactate transmembrane transporter activity IEP Enrichment
MF GO:0015298 solute:cation antiporter activity IEP Enrichment
MF GO:0015299 solute:proton antiporter activity IEP Enrichment
BP GO:0015711 organic anion transport IEP Enrichment
BP GO:0015718 monocarboxylic acid transport IEP Enrichment
BP GO:0015727 lactate transport IEP Enrichment
BP GO:0015748 organophosphate ester transport IEP Enrichment
BP GO:0015849 organic acid transport IEP Enrichment
BP GO:0015850 organic hydroxy compound transport IEP Enrichment
BP GO:0015914 phospholipid transport IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
BP GO:0017121 plasma membrane phospholipid scrambling IEP Enrichment
MF GO:0017128 phospholipid scramblase activity IEP Enrichment
MF GO:0019825 oxygen binding IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
CC GO:0031226 intrinsic component of plasma membrane IEP Enrichment
MF GO:0031419 cobalamin binding IEP Enrichment
BP GO:0034204 lipid translocation IEP Enrichment
BP GO:0045332 phospholipid translocation IEP Enrichment
BP GO:0046942 carboxylic acid transport IEP Enrichment
MF GO:0046943 carboxylic acid transmembrane transporter activity IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
BP GO:0061024 membrane organization IEP Enrichment
BP GO:0065008 regulation of biological quality IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0097035 regulation of membrane lipid distribution IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
MF GO:0140303 intramembrane lipid transporter activity IEP Enrichment
MF GO:1901618 organic hydroxy compound transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR005479 CbamoylP_synth_lsu-like_ATP-bd 159 376
IPR041265 PCC_BT 563 662
IPR000089 Biotin_lipoyl 672 737
IPR005481 BC-like_N 43 153
IPR005482 Biotin_COase_C 393 508
No external refs found!