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  5. Sro4328_g353720.1

Sro4328_g353720.1 (Contig3730.g28627)


Aliases : Contig3730.g28627

Description : Polyketide cyclase SnoaL-like [Interproscan].


Gene families : OG_01_0001175 (OrthoFinder) Phylogenetic Tree(s): OG0001175_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro4328_g353720.1
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
Sro2495_g329270.1 Contig3885.g29851 SnoaL-like domain [Interproscan]. 0.03 OrthoFinder
Sro2495_g329280.1 Contig3885.g29852 Polyketide cyclase SnoaL-like [Interproscan]. 0.04 OrthoFinder
Sro463_g148330.1 Contig3968.g30442 Polyketide cyclase SnoaL-like [Interproscan]. 0.04 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0030638 polyketide metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004520 endodeoxyribonuclease activity IEP Enrichment
MF GO:0004536 deoxyribonuclease activity IEP Enrichment
BP GO:0006310 DNA recombination IEP Enrichment
BP GO:0015074 DNA integration IEP Enrichment
MF GO:0016888 endodeoxyribonuclease activity, producing 5'-phosphomonoesters IEP Enrichment
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Enrichment
BP GO:0018142 protein-DNA covalent cross-linking IEP Enrichment
BP GO:0018143 nucleic acid-protein covalent cross-linking IEP Enrichment
MF GO:0019899 enzyme binding IEP Enrichment
MF GO:0019900 kinase binding IEP Enrichment
MF GO:0019901 protein kinase binding IEP Enrichment
InterPro domains Description Start Stop
IPR009959 Cyclase_SnoaL-like 68 194
No external refs found!