Aliases : Contig2589.g21019
Description : Sm-like protein LSm3
Gene families : OG_01_0004585 (OrthoFinder) Phylogenetic Tree(s): OG0004585_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Sro428_g140910.1 | |
Cluster | HCCA: Cluster_33 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cpa|evm.model.tig00020927.50 | tig00020927_g15980.t1 | RNA processing.RNA splicing.U6-associated LSm accessory... | 0.02 | OrthoFinder | |
Cre16.g662300 | 30777721 | RNA processing.RNA splicing.U6-associated LSm accessory... | 0.02 | OrthoFinder | |
Dusal.0165s00023.1 | 33193351 | LSM domain, eukaryotic/archaea-type [Interproscan]. | 0.01 | OrthoFinder | |
EOD14715 | No alias | LSM domain, eukaryotic/archaea-type [Interproscan]. | 0.06 | OrthoFinder | |
PTI_28G00710.1 | No alias | LSM domain, eukaryotic/archaea-type [Interproscan]. | 0.04 | OrthoFinder | |
TP17G01110.1 | No alias | LSM domain, eukaryotic/archaea-type [Interproscan]. | 0.03 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | Enrichment |
MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | Enrichment |
CC | GO:0005875 | microtubule associated complex | IEP | Enrichment |
BP | GO:0007017 | microtubule-based process | IEP | Enrichment |
MF | GO:0016859 | cis-trans isomerase activity | IEP | Enrichment |
BP | GO:0018193 | peptidyl-amino acid modification | IEP | Enrichment |
BP | GO:0018208 | peptidyl-proline modification | IEP | Enrichment |
CC | GO:0030286 | dynein complex | IEP | Enrichment |
CC | GO:1902494 | catalytic complex | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001163 | LSM_dom_euk/arc | 8 | 84 |
No external refs found! |